SMTL ID : 7xe6.1

T4 lysozyme mutant-S44C/C54T/N68C/A93C/C97A/T115C, pH7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

monomer

Ligands

2 x HEZ: HEXANE-1,6-DIOL(Non-covalent)

HEZ.1: 5 residues within 4Å: Chain A: K.16, I.17, K.19, Y.25, L.39 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.17, A:Y.25, A:L.39 Water bridges: A:I.17 HEZ.2: 3 residues within 4Å: Chain A: Y.88, C.93, R.96 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Y.88

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: G.30, H.31, L.32, D.70, F.104 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.31, A:L.32 GOL.4: 0 residues within 4Å: (No contacts) 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.5

3 x NA: SODIUM ION(Non-functional Binders)

NA.5: 2 residues within 4Å: Chain A: C.44, K.48 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.48 NA.6: 4 residues within 4Å: Chain A: R.125, W.126, D.127, E.128 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.125, A:D.127, A:E.128 NA.7: 4 residues within 4Å: Chain A: G.77, R.80, N.81, E.108 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.77 Water bridges: A:R.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hiromoto, T. et al., Creation of Cross-Linked Crystals With Intermolecular Disulfide Bonds Connecting Symmetry-Related Molecules Allows Retention of Tertiary Structure in Different Solvent Conditions. Front Mol Biosci (2022)

Release Date

2023-03-22

Peptides

Endolysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Endolysin

Related Entries With Identical Sequence