SMTL ID : 7xec.1

Cryo-EM structure of human ABCD1 E630Q in the presence of ATP in inward-facing state 2

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.1: 12 residues within 4Å: Chain A: T.483, P.484, V.489, N.509, G.510, G.512, K.513, S.514, S.515, R.518, W.524, Q.544 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:G.510, A:G.512, A:K.513, A:S.514, A:S.514, A:S.515, A:Q.544, A:Q.544, A:Q.630 Salt bridges: A:K.513, A:K.513, A:R.518 pi-Cation interactions: A:R.518

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiong, C. et al., Structural insights into substrate recognition and translocation of human peroxisomal ABC transporter ALDP. Signal Transduct Target Ther (2023)

Release Date

2023-03-29

Peptides

ATP-binding cassette sub-family D member 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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ATP-binding cassette sub-family D member 1