SMTL ID : 7xer.1

Structure of mTRPV2_Q525T

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

4 x CLR: CHOLESTEROL(Non-covalent)

CLR.1: 10 residues within 4Å: Chain A: Y.466, V.501, L.505, S.521, I.524, T.525, I.528 Chain B: F.542, L.620, L.627 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain B Hydrophobic interactions: A:Y.466, A:T.525, A:I.528, B:F.542, B:L.620, B:L.627 CLR.2: 10 residues within 4Å: Chain B: Y.466, V.501, L.502, L.505, S.521, I.524, T.525 Chain C: F.542, L.620, L.627 8 PLIP interactions: 5 interactions with chain B, 3 interactions with chain C Hydrophobic interactions: B:Y.466, B:V.501, B:L.502, B:L.505, B:T.525, C:F.542, C:L.620, C:L.627 CLR.3: 10 residues within 4Å: Chain C: Y.466, V.501, L.505, S.521, I.524, T.525, I.528 Chain D: F.542, L.620, L.627 6 PLIP interactions: 3 interactions with chain C, 3 interactions with chain D Hydrophobic interactions: C:Y.466, C:T.525, C:I.528, D:F.542, D:L.620, D:L.627 CLR.4: 9 residues within 4Å: Chain A: F.542, L.620, L.627 Chain D: Y.466, V.501, L.505, S.521, I.524, T.525 5 PLIP interactions: 2 interactions with chain D, 3 interactions with chain A Hydrophobic interactions: D:Y.466, D:T.525, A:F.542, A:L.620, A:L.627

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Su, N. et al., Structural mechanisms of TRPV2 modulation by endogenous and exogenous ligands. Nat.Chem.Biol. (2023)

Release Date

2022-08-17

Peptides

Transient receptor potential cation channel subfamily V member 2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Transient receptor potential cation channel subfamily V member 2