SMTL ID : 7xht.1

Structure of the OgeuIscB-omega RNA-target DNA complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: A.67, G.68 No protein-ligand interaction detected (PLIP) MG.3: 3 residues within 4Å: Chain D: D.61, E.193, N.195 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:D.61, D:E.193

1 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)

LDA.2: 11 residues within 4Å: Chain D: I.8, V.36, E.37, P.40, Q.44, F.80, V.177, K.180, V.181, K.183, I.184 7 PLIP interactions: 7 interactions with chain D Hydrophobic interactions: D:I.8, D:V.36, D:F.80, D:V.177, D:K.180, D:V.181, D:K.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kato, K. et al., Structure of the IscB-omega RNA ribonucleoprotein complex, the likely ancestor of CRISPR-Cas9. Nat Commun (2022)

Release Date

2022-12-14

Peptides

OgeuIscB: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

D
A

OgeuIscB

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