SMTL ID : 7xkt.1

Human Cx36/GJD2 (BRIL-fused mutant) gap junction channel in detergents at 2.2 Angstroms resolution

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-12-mer

Ligands

72 x MC3: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)(Non-functional Binders)

MC3.1: 6 residues within 4Å: Chain A: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.3 Ligand excluded by PLIP MC3.2: 9 residues within 4Å: Chain A: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.3, MC3.4, MC3.17, LHG.18 Ligand excluded by PLIP MC3.3: 7 residues within 4Å: Chain A: V.282, A.286, I.290 Ligands: MC3.1, MC3.2, MC3.4, MC3.17 Ligand excluded by PLIP MC3.4: 13 residues within 4Å: Chain A: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Chain B: F.81, M.85, T.88 Ligands: MC3.2, MC3.3, MC3.17 Ligand excluded by PLIP MC3.7: 11 residues within 4Å: Chain A: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Chain F: L.36, I.40 Ligands: Y01.6, Y01.50 Ligand excluded by PLIP MC3.8: 4 residues within 4Å: Ligands: LHG.9, MC3.47, MC3.48, MC3.49 Ligand excluded by PLIP MC3.10: 6 residues within 4Å: Chain B: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.12 Ligand excluded by PLIP MC3.11: 9 residues within 4Å: Chain B: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.12, MC3.13, MC3.26, LHG.27 Ligand excluded by PLIP MC3.12: 7 residues within 4Å: Chain B: V.282, A.286, I.290 Ligands: MC3.10, MC3.11, MC3.13, MC3.26 Ligand excluded by PLIP MC3.13: 13 residues within 4Å: Chain B: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Chain C: F.81, M.85, T.88 Ligands: MC3.11, MC3.12, MC3.26 Ligand excluded by PLIP MC3.16: 11 residues within 4Å: Chain A: L.36, I.40 Chain B: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Ligands: Y01.5, Y01.15 Ligand excluded by PLIP MC3.17: 4 residues within 4Å: Ligands: MC3.2, MC3.3, MC3.4, LHG.18 Ligand excluded by PLIP MC3.19: 6 residues within 4Å: Chain C: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.21 Ligand excluded by PLIP MC3.20: 9 residues within 4Å: Chain C: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.21, MC3.22, MC3.35, LHG.36 Ligand excluded by PLIP MC3.21: 7 residues within 4Å: Chain C: V.282, A.286, I.290 Ligands: MC3.19, MC3.20, MC3.22, MC3.35 Ligand excluded by PLIP MC3.22: 13 residues within 4Å: Chain C: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Chain D: F.81, M.85, T.88 Ligands: MC3.20, MC3.21, MC3.35 Ligand excluded by PLIP MC3.25: 11 residues within 4Å: Chain B: L.36, I.40 Chain C: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Ligands: Y01.14, Y01.24 Ligand excluded by PLIP MC3.26: 4 residues within 4Å: Ligands: MC3.11, MC3.12, MC3.13, LHG.27 Ligand excluded by PLIP MC3.28: 6 residues within 4Å: Chain D: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.30 Ligand excluded by PLIP MC3.29: 9 residues within 4Å: Chain D: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.30, MC3.31, MC3.44, LHG.45 Ligand excluded by PLIP MC3.30: 7 residues within 4Å: Chain D: V.282, A.286, I.290 Ligands: MC3.28, MC3.29, MC3.31, MC3.44 Ligand excluded by PLIP MC3.31: 13 residues within 4Å: Chain D: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Chain E: F.81, M.85, T.88 Ligands: MC3.29, MC3.30, MC3.44 Ligand excluded by PLIP MC3.34: 11 residues within 4Å: Chain C: L.36, I.40 Chain D: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Ligands: Y01.23, Y01.33 Ligand excluded by PLIP MC3.35: 4 residues within 4Å: Ligands: MC3.20, MC3.21, MC3.22, LHG.36 Ligand excluded by PLIP MC3.37: 6 residues within 4Å: Chain E: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.39 Ligand excluded by PLIP MC3.38: 9 residues within 4Å: Chain E: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.39, MC3.40, MC3.53, LHG.54 Ligand excluded by PLIP MC3.39: 7 residues within 4Å: Chain E: V.282, A.286, I.290 Ligands: MC3.37, MC3.38, MC3.40, MC3.53 Ligand excluded by PLIP MC3.40: 13 residues within 4Å: Chain E: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Chain F: F.81, M.85, T.88 Ligands: MC3.38, MC3.39, MC3.53 Ligand excluded by PLIP MC3.43: 11 residues within 4Å: Chain D: L.36, I.40 Chain E: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Ligands: Y01.32, Y01.42 Ligand excluded by PLIP MC3.44: 4 residues within 4Å: Ligands: MC3.29, MC3.30, MC3.31, LHG.45 Ligand excluded by PLIP MC3.46: 6 residues within 4Å: Chain F: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.48 Ligand excluded by PLIP MC3.47: 9 residues within 4Å: Chain F: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.8, LHG.9, MC3.48, MC3.49 Ligand excluded by PLIP MC3.48: 7 residues within 4Å: Chain F: V.282, A.286, I.290 Ligands: MC3.8, MC3.46, MC3.47, MC3.49 Ligand excluded by PLIP MC3.49: 13 residues within 4Å: Chain A: F.81, M.85, T.88 Chain F: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Ligands: MC3.8, MC3.47, MC3.48 Ligand excluded by PLIP MC3.52: 11 residues within 4Å: Chain E: L.36, I.40 Chain F: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Ligands: Y01.41, Y01.51 Ligand excluded by PLIP MC3.53: 4 residues within 4Å: Ligands: MC3.38, MC3.39, MC3.40, LHG.54 Ligand excluded by PLIP MC3.55: 6 residues within 4Å: Chain G: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.57 Ligand excluded by PLIP MC3.56: 9 residues within 4Å: Chain G: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.57, MC3.58, MC3.71, LHG.72 Ligand excluded by PLIP MC3.57: 7 residues within 4Å: Chain G: V.282, A.286, I.290 Ligands: MC3.55, MC3.56, MC3.58, MC3.71 Ligand excluded by PLIP MC3.58: 13 residues within 4Å: Chain G: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Chain H: F.81, M.85, T.88 Ligands: MC3.56, MC3.57, MC3.71 Ligand excluded by PLIP MC3.61: 11 residues within 4Å: Chain G: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Chain L: L.36, I.40 Ligands: Y01.60, Y01.104 Ligand excluded by PLIP MC3.62: 4 residues within 4Å: Ligands: LHG.63, MC3.101, MC3.102, MC3.103 Ligand excluded by PLIP MC3.64: 6 residues within 4Å: Chain H: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.66 Ligand excluded by PLIP MC3.65: 9 residues within 4Å: Chain H: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.66, MC3.67, MC3.80, LHG.81 Ligand excluded by PLIP MC3.66: 7 residues within 4Å: Chain H: V.282, A.286, I.290 Ligands: MC3.64, MC3.65, MC3.67, MC3.80 Ligand excluded by PLIP MC3.67: 13 residues within 4Å: Chain H: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Chain I: F.81, M.85, T.88 Ligands: MC3.65, MC3.66, MC3.80 Ligand excluded by PLIP MC3.70: 11 residues within 4Å: Chain G: L.36, I.40 Chain H: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Ligands: Y01.59, Y01.69 Ligand excluded by PLIP MC3.71: 4 residues within 4Å: Ligands: MC3.56, MC3.57, MC3.58, LHG.72 Ligand excluded by PLIP MC3.73: 6 residues within 4Å: Chain I: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.75 Ligand excluded by PLIP MC3.74: 9 residues within 4Å: Chain I: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.75, MC3.76, MC3.89, LHG.90 Ligand excluded by PLIP MC3.75: 7 residues within 4Å: Chain I: V.282, A.286, I.290 Ligands: MC3.73, MC3.74, MC3.76, MC3.89 Ligand excluded by PLIP MC3.76: 13 residues within 4Å: Chain I: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Chain J: F.81, M.85, T.88 Ligands: MC3.74, MC3.75, MC3.89 Ligand excluded by PLIP MC3.79: 11 residues within 4Å: Chain H: L.36, I.40 Chain I: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Ligands: Y01.68, Y01.78 Ligand excluded by PLIP MC3.80: 4 residues within 4Å: Ligands: MC3.65, MC3.66, MC3.67, LHG.81 Ligand excluded by PLIP MC3.82: 6 residues within 4Å: Chain J: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.84 Ligand excluded by PLIP MC3.83: 9 residues within 4Å: Chain J: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.84, MC3.85, MC3.98, LHG.99 Ligand excluded by PLIP MC3.84: 7 residues within 4Å: Chain J: V.282, A.286, I.290 Ligands: MC3.82, MC3.83, MC3.85, MC3.98 Ligand excluded by PLIP MC3.85: 13 residues within 4Å: Chain J: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Chain K: F.81, M.85, T.88 Ligands: MC3.83, MC3.84, MC3.98 Ligand excluded by PLIP MC3.88: 11 residues within 4Å: Chain I: L.36, I.40 Chain J: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Ligands: Y01.77, Y01.87 Ligand excluded by PLIP MC3.89: 4 residues within 4Å: Ligands: MC3.74, MC3.75, MC3.76, LHG.90 Ligand excluded by PLIP MC3.91: 6 residues within 4Å: Chain K: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.93 Ligand excluded by PLIP MC3.92: 9 residues within 4Å: Chain K: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.93, MC3.94, MC3.107, LHG.108 Ligand excluded by PLIP MC3.93: 7 residues within 4Å: Chain K: V.282, A.286, I.290 Ligands: MC3.91, MC3.92, MC3.94, MC3.107 Ligand excluded by PLIP MC3.94: 13 residues within 4Å: Chain K: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Chain L: F.81, M.85, T.88 Ligands: MC3.92, MC3.93, MC3.107 Ligand excluded by PLIP MC3.97: 11 residues within 4Å: Chain J: L.36, I.40 Chain K: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Ligands: Y01.86, Y01.96 Ligand excluded by PLIP MC3.98: 4 residues within 4Å: Ligands: MC3.83, MC3.84, MC3.85, LHG.99 Ligand excluded by PLIP MC3.100: 6 residues within 4Å: Chain L: F.250, S.251, V.282, F.285, A.286 Ligands: MC3.102 Ligand excluded by PLIP MC3.101: 9 residues within 4Å: Chain L: T.275, T.278, V.279, V.282, F.283 Ligands: MC3.62, LHG.63, MC3.102, MC3.103 Ligand excluded by PLIP MC3.102: 7 residues within 4Å: Chain L: V.282, A.286, I.290 Ligands: MC3.62, MC3.100, MC3.101, MC3.103 Ligand excluded by PLIP MC3.103: 13 residues within 4Å: Chain G: F.81, M.85, T.88 Chain L: V.29, V.30, F.33, F.283, A.286, V.287, I.290 Ligands: MC3.62, MC3.101, MC3.102 Ligand excluded by PLIP MC3.106: 11 residues within 4Å: Chain K: L.36, I.40 Chain L: I.35, A.39, E.43, V.80, I.83, I.84, C.87 Ligands: Y01.95, Y01.105 Ligand excluded by PLIP MC3.107: 4 residues within 4Å: Ligands: MC3.92, MC3.93, MC3.94, LHG.108 Ligand excluded by PLIP

24 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)

Y01.5: 10 residues within 4Å: Chain A: T.28, I.32, L.36 Chain B: L.91, I.94, T.95, V.98 Ligands: Y01.6, Y01.15, MC3.16 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:L.91 Y01.6: 14 residues within 4Å: Chain A: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.5, MC3.7, Y01.50 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.32, A:I.35 Y01.14: 10 residues within 4Å: Chain B: T.28, I.32, L.36 Chain C: L.91, I.94, T.95, V.98 Ligands: Y01.15, Y01.24, MC3.25 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:L.91 Y01.15: 14 residues within 4Å: Chain B: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.5, Y01.14, MC3.16 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:I.32, B:I.35 Y01.23: 10 residues within 4Å: Chain C: T.28, I.32, L.36 Chain D: L.91, I.94, T.95, V.98 Ligands: Y01.24, Y01.33, MC3.34 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:L.91 Y01.24: 14 residues within 4Å: Chain C: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.14, Y01.23, MC3.25 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:I.32, C:I.35 Y01.32: 10 residues within 4Å: Chain D: T.28, I.32, L.36 Chain E: L.91, I.94, T.95, V.98 Ligands: Y01.33, Y01.42, MC3.43 1 PLIP interactions: 1 interactions with chain E Hydrophobic interactions: E:L.91 Y01.33: 14 residues within 4Å: Chain D: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.23, Y01.32, MC3.34 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:I.32, D:I.35 Y01.41: 10 residues within 4Å: Chain E: T.28, I.32, L.36 Chain F: L.91, I.94, T.95, V.98 Ligands: Y01.42, Y01.51, MC3.52 1 PLIP interactions: 1 interactions with chain F Hydrophobic interactions: F:L.91 Y01.42: 14 residues within 4Å: Chain E: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.32, Y01.41, MC3.43 2 PLIP interactions: 2 interactions with chain E Hydrophobic interactions: E:I.32, E:I.35 Y01.50: 10 residues within 4Å: Chain A: L.91, I.94, T.95, V.98 Chain F: T.28, I.32, L.36 Ligands: Y01.6, MC3.7, Y01.51 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.91 Y01.51: 14 residues within 4Å: Chain F: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.41, Y01.50, MC3.52 2 PLIP interactions: 2 interactions with chain F Hydrophobic interactions: F:I.32, F:I.35 Y01.59: 10 residues within 4Å: Chain G: T.28, I.32, L.36 Chain H: L.91, I.94, T.95, V.98 Ligands: Y01.60, Y01.69, MC3.70 1 PLIP interactions: 1 interactions with chain H Hydrophobic interactions: H:L.91 Y01.60: 14 residues within 4Å: Chain G: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.59, MC3.61, Y01.104 2 PLIP interactions: 2 interactions with chain G Hydrophobic interactions: G:I.32, G:I.35 Y01.68: 10 residues within 4Å: Chain H: T.28, I.32, L.36 Chain I: L.91, I.94, T.95, V.98 Ligands: Y01.69, Y01.78, MC3.79 1 PLIP interactions: 1 interactions with chain I Hydrophobic interactions: I:L.91 Y01.69: 14 residues within 4Å: Chain H: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.59, Y01.68, MC3.70 2 PLIP interactions: 2 interactions with chain H Hydrophobic interactions: H:I.32, H:I.35 Y01.77: 10 residues within 4Å: Chain I: T.28, I.32, L.36 Chain J: L.91, I.94, T.95, V.98 Ligands: Y01.78, Y01.87, MC3.88 1 PLIP interactions: 1 interactions with chain J Hydrophobic interactions: J:L.91 Y01.78: 14 residues within 4Å: Chain I: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.68, Y01.77, MC3.79 2 PLIP interactions: 2 interactions with chain I Hydrophobic interactions: I:I.32, I:I.35 Y01.86: 10 residues within 4Å: Chain J: T.28, I.32, L.36 Chain K: L.91, I.94, T.95, V.98 Ligands: Y01.87, Y01.96, MC3.97 1 PLIP interactions: 1 interactions with chain K Hydrophobic interactions: K:L.91 Y01.87: 14 residues within 4Å: Chain J: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.77, Y01.86, MC3.88 2 PLIP interactions: 2 interactions with chain J Hydrophobic interactions: J:I.32, J:I.35 Y01.95: 10 residues within 4Å: Chain K: T.28, I.32, L.36 Chain L: L.91, I.94, T.95, V.98 Ligands: Y01.96, Y01.105, MC3.106 1 PLIP interactions: 1 interactions with chain L Hydrophobic interactions: L:L.91 Y01.96: 14 residues within 4Å: Chain K: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.86, Y01.95, MC3.97 2 PLIP interactions: 2 interactions with chain K Hydrophobic interactions: K:I.32, K:I.35 Y01.104: 10 residues within 4Å: Chain G: L.91, I.94, T.95, V.98 Chain L: T.28, I.32, L.36 Ligands: Y01.60, MC3.61, Y01.105 1 PLIP interactions: 1 interactions with chain G Hydrophobic interactions: G:L.91 Y01.105: 14 residues within 4Å: Chain L: T.28, V.31, I.32, I.35, L.36, C.87, S.90, F.93, I.94, Y.226, R.233 Ligands: Y01.95, Y01.104, MC3.106 2 PLIP interactions: 2 interactions with chain L Hydrophobic interactions: L:I.32, L:I.35

12 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)

LHG.9: 16 residues within 4Å: Chain A: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Chain F: T.275, V.279 Ligands: MC3.8, MC3.47 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.73, A:F.81, A:L.236, A:F.240 LHG.18: 16 residues within 4Å: Chain A: T.275, V.279 Chain B: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Ligands: MC3.2, MC3.17 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:I.73, B:F.81, B:L.236, B:F.240 LHG.27: 16 residues within 4Å: Chain B: T.275, V.279 Chain C: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Ligands: MC3.11, MC3.26 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:I.73, C:F.81, C:L.236, C:F.240 LHG.36: 16 residues within 4Å: Chain C: T.275, V.279 Chain D: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Ligands: MC3.20, MC3.35 4 PLIP interactions: 4 interactions with chain D Hydrophobic interactions: D:I.73, D:F.81, D:L.236, D:F.240 LHG.45: 16 residues within 4Å: Chain D: T.275, V.279 Chain E: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Ligands: MC3.29, MC3.44 4 PLIP interactions: 4 interactions with chain E Hydrophobic interactions: E:I.73, E:F.81, E:L.236, E:F.240 LHG.54: 16 residues within 4Å: Chain E: T.275, V.279 Chain F: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Ligands: MC3.38, MC3.53 4 PLIP interactions: 4 interactions with chain F Hydrophobic interactions: F:I.73, F:F.81, F:L.236, F:F.240 LHG.63: 16 residues within 4Å: Chain G: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Chain L: T.275, V.279 Ligands: MC3.62, MC3.101 4 PLIP interactions: 4 interactions with chain G Hydrophobic interactions: G:I.73, G:F.81, G:L.236, G:F.240 LHG.72: 16 residues within 4Å: Chain G: T.275, V.279 Chain H: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Ligands: MC3.56, MC3.71 4 PLIP interactions: 4 interactions with chain H Hydrophobic interactions: H:I.73, H:F.81, H:L.236, H:F.240 LHG.81: 16 residues within 4Å: Chain H: T.275, V.279 Chain I: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Ligands: MC3.65, MC3.80 4 PLIP interactions: 4 interactions with chain I Hydrophobic interactions: I:I.73, I:F.81, I:L.236, I:F.240 LHG.90: 16 residues within 4Å: Chain I: T.275, V.279 Chain J: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Ligands: MC3.74, MC3.89 4 PLIP interactions: 4 interactions with chain J Hydrophobic interactions: J:I.73, J:F.81, J:L.236, J:F.240 LHG.99: 16 residues within 4Å: Chain J: T.275, V.279 Chain K: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Ligands: MC3.83, MC3.98 4 PLIP interactions: 4 interactions with chain K Hydrophobic interactions: K:I.73, K:F.81, K:L.236, K:F.240 LHG.108: 16 residues within 4Å: Chain K: T.275, V.279 Chain L: P.72, I.73, R.77, Y.78, F.81, A.235, L.236, G.239, F.240, G.243, F.246, L.247 Ligands: MC3.92, MC3.107 4 PLIP interactions: 4 interactions with chain L Hydrophobic interactions: L:I.73, L:F.81, L:L.236, L:F.240

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, S.N. et al., Cryo-EM structures of human Cx36/GJD2 neuronal gap junction channel. Nat Commun (2023)

Release Date

2023-03-22

Peptides

Gap junction delta-2 protein,Soluble cytochrome b562: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Gap junction delta-2 protein,Soluble cytochrome b562