SMTL ID : 7xpi.1

Structure of a oxidoreductase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 36 residues within 4Å: Chain A: G.7, G.8, G.9, F.10, G.11, D.30, M.31, R.32, N.38, V.39, L.42, G.69, K.70, V.71, A.97, T.98, G.99, S.100, K.107, N.109, A.141, A.142, I.234, N.237, S.239, A.240, G.273, D.274, K.282, M.283, A.284, Y.285, A.287, K.344, F.349 Chain B: Y.333 36 PLIP interactions: 3 interactions with chain B, 33 interactions with chain A Hydrophobic interactions: B:Y.333, A:L.42, A:I.234 pi-Stacking: B:Y.333, B:Y.333 Hydrogen bonds: A:F.10, A:G.11, A:M.31, A:R.32, A:R.32, A:N.38, A:N.38, A:Y.58, A:V.71, A:V.71, A:G.99, A:S.100, A:K.107, A:N.109, A:D.274, A:K.282, A:A.284, A:Y.285, A:K.344 Water bridges: A:G.8, A:G.9, A:G.9, A:Y.58, A:S.100, A:K.107, A:N.109, A:N.237, A:S.239, A:A.240, A:C.275, A:A.287 FAD.2: 36 residues within 4Å: Chain A: Y.333 Chain B: G.7, G.8, G.9, F.10, G.11, D.30, M.31, R.32, N.38, V.39, L.42, G.69, K.70, V.71, A.97, T.98, G.99, S.100, K.107, N.109, A.141, A.142, I.234, N.237, S.239, A.240, G.273, D.274, K.282, M.283, A.284, Y.285, A.287, K.344, F.349 35 PLIP interactions: 32 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:L.42, B:I.234, A:Y.333 Hydrogen bonds: B:F.10, B:G.11, B:M.31, B:R.32, B:R.32, B:N.38, B:N.38, B:V.71, B:V.71, B:G.99, B:S.100, B:K.107, B:N.109, B:D.274, B:K.282, B:A.284, B:Y.285, B:K.344 Water bridges: B:G.8, B:G.9, B:G.9, B:Y.58, B:S.100, B:K.107, B:N.109, B:N.237, B:S.239, B:A.240, B:C.275, B:A.287 pi-Stacking: A:Y.333, A:Y.333

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lv, Y. et al., Structural insights into FSP1 catalysis and ferroptosis inhibition. Nat Commun (2023)

Release Date

2023-06-14

Peptides

Apoptosis inducing factor mitochondria associated 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Apoptosis inducing factor mitochondria associated 2

Related Entries With Identical Sequence