SMTL ID : 7xqs.1

The structure of FLA-K*00701/KP-CoV-9

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.69 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ARG- SER- PHE- ILE- GLU- ASP- LEU- LEU- PHE: peptide from Spike glycoprotein(Non-covalent)

ARG-SER-PHE-ILE-GLU-ASP-LEU-LEU-PHE.1: 25 residues within 4Å: Chain A: Y.7, Y.59, E.63, N.66, N.70, N.73, V.76, N.77, T.80, V.81, Y.84, L.95, R.97, Y.99, V.116, Y.123, T.143, K.146, W.147, V.152, Q.155, E.156, Y.159, W.167, Y.171 31 PLIP interactions: 31 interactions with chain A Hydrophobic interactions: A:V.76, A:V.81, A:L.95, A:Y.99, A:V.116, A:Y.123, A:W.147, A:W.147, A:V.152, A:E.156, A:Y.159, A:Y.159, A:Y.159, A:W.167 Hydrogen bonds: A:Y.7, A:Y.59, A:E.63, A:N.66, A:N.73, A:N.77, A:N.77, A:Y.99, A:Y.99, A:T.143, A:Y.159, A:Y.171, A:Y.171 Salt bridges: A:E.62, A:E.63, A:R.97, A:K.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qiao, P.W. et al., Analysis of the characteristics of feline major histocompatibility complex class I molecules cross-presenting coronavirus peptides. To Be Published

Release Date

2023-11-08

Peptides

MHC class I antigen alpha chain: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

MHC class I antigen alpha chain

Beta-2-microglobulin

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