- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-trimer
- Ligands
- 3 x GLU: GLUTAMIC ACID(Non-covalent)
- 3 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)
Y01.2: 10 residues within 4Å:- Chain A: R.115, T.118, R.119, V.122, Y.123, S.126, I.335, V.339, L.496
- Ligands: PC1.3
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:T.118, A:V.122, A:I.335, A:V.339, A:L.496
- Salt bridges: A:R.119
Y01.12: 10 residues within 4Å:- Chain B: R.115, T.118, R.119, V.122, Y.123, S.126, I.335, V.339, L.496
- Ligands: PC1.13
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:T.118, B:V.122, B:I.335, B:V.339, B:L.496
- Salt bridges: B:R.119
Y01.22: 10 residues within 4Å:- Chain C: R.115, T.118, R.119, V.122, Y.123, S.126, I.335, V.339, L.496
- Ligands: PC1.23
6 PLIP interactions:6 interactions with chain C- Hydrophobic interactions: C:T.118, C:V.122, C:I.335, C:V.339, C:L.496
- Salt bridges: C:R.119
- 24 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-functional Binders)(Non-covalent)
PC1.3: 2 residues within 4Å:- Ligands: Y01.2, PC1.4
Ligand excluded by PLIPPC1.4: 4 residues within 4Å:- Chain A: T.118, V.122, M.125
- Ligands: PC1.3
Ligand excluded by PLIPPC1.5: 3 residues within 4Å:- Chain A: F.176
- Chain B: M.283
- Ligands: PC1.20
Ligand excluded by PLIPPC1.6: 7 residues within 4Å:- Chain A: G.104, L.105, L.108, I.396, L.434, V.437
- Ligands: PC1.7
Ligand excluded by PLIPPC1.7: 9 residues within 4Å:- Chain A: L.89, I.93, L.96, S.100, V.437, G.438, V.448, T.449
- Ligands: PC1.6
Ligand excluded by PLIPPC1.8: 7 residues within 4Å:- Chain A: G.328, F.345, F.348, W.355, M.477, S.480, V.481
Ligand excluded by PLIPPC1.9: 4 residues within 4Å:- Chain A: L.64, V.74, I.78, C.294
Ligand excluded by PLIPPC1.10: 6 residues within 4Å:- Chain A: M.88, M.283, I.284, W.286, Y.287
- Ligands: PC1.25
Ligand excluded by PLIPPC1.13: 2 residues within 4Å:- Ligands: Y01.12, PC1.14
Ligand excluded by PLIPPC1.14: 4 residues within 4Å:- Chain B: T.118, V.122, M.125
- Ligands: PC1.13
Ligand excluded by PLIPPC1.15: 3 residues within 4Å:- Chain B: F.176
- Chain C: M.283
- Ligands: PC1.30
Ligand excluded by PLIPPC1.16: 7 residues within 4Å:- Chain B: G.104, L.105, L.108, I.396, L.434, V.437
- Ligands: PC1.17
Ligand excluded by PLIPPC1.17: 9 residues within 4Å:- Chain B: L.89, I.93, L.96, S.100, V.437, G.438, V.448, T.449
- Ligands: PC1.16
Ligand excluded by PLIPPC1.18: 7 residues within 4Å:- Chain B: G.328, F.345, F.348, W.355, M.477, S.480, V.481
Ligand excluded by PLIPPC1.19: 4 residues within 4Å:- Chain B: L.64, V.74, I.78, C.294
Ligand excluded by PLIPPC1.20: 7 residues within 4Å:- Chain A: A.251
- Chain B: M.88, M.283, I.284, W.286, Y.287
- Ligands: PC1.5
Ligand excluded by PLIPPC1.23: 2 residues within 4Å:- Ligands: Y01.22, PC1.24
Ligand excluded by PLIPPC1.24: 4 residues within 4Å:- Chain C: T.118, V.122, M.125
- Ligands: PC1.23
Ligand excluded by PLIPPC1.25: 3 residues within 4Å:- Chain A: M.283
- Chain C: F.176
- Ligands: PC1.10
Ligand excluded by PLIPPC1.26: 7 residues within 4Å:- Chain C: G.104, L.105, L.108, I.396, L.434, V.437
- Ligands: PC1.27
Ligand excluded by PLIPPC1.27: 9 residues within 4Å:- Chain C: L.89, I.93, L.96, S.100, V.437, G.438, V.448, T.449
- Ligands: PC1.26
Ligand excluded by PLIPPC1.28: 7 residues within 4Å:- Chain C: G.328, F.345, F.348, W.355, M.477, S.480, V.481
Ligand excluded by PLIPPC1.29: 4 residues within 4Å:- Chain C: L.64, V.74, I.78, C.294
Ligand excluded by PLIPPC1.30: 6 residues within 4Å:- Chain C: M.88, M.283, I.284, W.286, Y.287
- Ligands: PC1.15
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhang, Z. et al., Structural basis of ligand binding modes of human EAAT2. Nat Commun (2022)
- Release Date
- 2022-06-22
- Peptides
- Excitatory amino acid transporter 2: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-trimer
- Ligands
- 3 x GLU: GLUTAMIC ACID(Non-covalent)
- 3 x Y01: CHOLESTEROL HEMISUCCINATE(Non-covalent)
- 24 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-functional Binders)(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zhang, Z. et al., Structural basis of ligand binding modes of human EAAT2. Nat Commun (2022)
- Release Date
- 2022-06-22
- Peptides
- Excitatory amino acid transporter 2: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C - Membrane
-
We predict this structure to be a membrane protein.