SMTL ID : 7xt3.1

Crystal Structure of Hepatitis virus A 2C protein 128-335 aa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 8 residues within 4Å: Chain A: G.19, G.20, G.21, K.22, S.23, L.24, L.153 Ligands: PO4.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.19, A:G.21, A:K.22, A:S.23, A:S.23, A:L.24 PO4.2: 7 residues within 4Å: Chain A: R.18, G.19, G.20, K.22, S.23, D.68 Ligands: PO4.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.19, A:S.23 Water bridges: A:R.18 Salt bridges: A:K.22 PO4.3: 9 residues within 4Å: Chain A: Y.37, L.62, R.91, N.93, S.105, S.106, F.108, V.192, K.196 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.93, A:S.105 Salt bridges: A:R.91, A:K.196

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, P. et al., Biochemical and structural characterization of hepatitis A virus 2C reveals an unusual ribonuclease activity on single-stranded RNA. Nucleic Acids Res. (2022)

Release Date

2022-07-27

Peptides

Genome polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Genome polyprotein