SMTL ID : 7xwf.1

RLGSGG-AtPRT6 UBR box (highest resolution)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-dimer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.9, C.37, C.60, C.72, H.75 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.37, A:C.60, A:C.72, A:H.75 ZN.2: 6 residues within 4Å: Chain A: C.9, S.11, C.34, C.37, C.58, C.60 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.9, A:C.34, A:C.37, A:C.58 ZN.3: 5 residues within 4Å: Chain A: C.22, T.24, C.25, H.43, H.46 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.22, A:C.25, A:H.43, A:H.46 ZN.4: 5 residues within 4Å: Chain B: C.9, C.37, C.60, C.72, H.75 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.37, B:C.60, B:C.72, B:H.75 ZN.5: 6 residues within 4Å: Chain B: C.9, S.11, C.34, C.37, C.58, C.60 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.9, B:C.34, B:C.37, B:C.58 ZN.6: 5 residues within 4Å: Chain B: C.22, T.24, C.25, H.43, H.46 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.22, B:C.25, B:H.43, B:H.46

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, L. et al., Structural analyses of plant PRT6-UBR box for Cys-Arg/N-degron pathway and insights into the plant submergence resistance. To Be Published

Release Date

2023-05-31

Peptides

E3 ubiquitin-protein ligase PRT6: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

E3 ubiquitin-protein ligase PRT6

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