SMTL ID : 7y1s.1

Crystal structure of apo leucyl aminopeptidase from Bacillus amyloliquefaciens

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

monomer

Ligands

1 x CO3: CARBONATE ION(Non-functional Binders)

CO3.1: 8 residues within 4Å: Chain A: K.284, D.366, A.367, E.368, G.369, R.370, L.394 Ligands: ZN.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.370, A:R.370, A:L.394

1 x NI: NICKEL (II) ION(Non-covalent)

NI.2: 1 residues within 4Å: Chain A: H.33 No protein-ligand interaction detected (PLIP)

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: D.289, D.366, E.368 Ligands: ZN.4 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.289, A:D.366, A:D.366, A:E.368 ZN.4: 6 residues within 4Å: Chain A: K.284, D.289, D.307, E.368 Ligands: CO3.1, ZN.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.289, A:D.307, A:E.368

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, P. et al., Crystal structure of apo leucyl aminopeptidase from Bacillus amyloliquefaciens. To Be Published

Release Date

2023-07-05

Peptides

leucyl aminopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

leucyl aminopeptidase