SMTL ID : 7y3m.3 (2 other biounits)

Structure of SALL4 ZFC1 bound with 16 bp AT-rich dsDNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.72 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.10, C.13, H.26, H.30 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.10, A:C.13, A:H.26, A:H.30 ZN.2: 5 residues within 4Å: Chain A: C.38, V.40, C.41, H.54, H.58 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.38, A:C.41, A:H.54, A:H.58 ZN.3: 5 residues within 4Å: Chain D: C.10, Y.12, C.13, H.26, H.30 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:C.10, D:H.26, D:H.30 ZN.4: 4 residues within 4Å: Chain D: C.38, C.41, H.54, H.58 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.38, D:C.41, D:H.54, D:H.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ru, W. et al., Structural studies of SALL family protein zinc finger cluster domains in complex with DNA reveal preferential binding to an AATA tetranucleotide motif. J.Biol.Chem. (2022)

Release Date

2022-10-26

Peptides

Sal-like protein 4: AD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
J

D
I

Sal-like protein 4

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