SMTL ID : 7y4r.1

Structure of RclX

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

homo-hexamer

Ligands

5 x PEO: HYDROGEN PEROXIDE(Non-functional Binders)

PEO.1: 4 residues within 4Å: Chain A: Y.30, C.63, H.67 Chain D: G.94 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.67 PEO.3: 3 residues within 4Å: Chain B: Y.30, C.63, H.67 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.30, B:Y.30, B:H.67 PEO.4: 4 residues within 4Å: Chain C: Y.30, C.63, V.66, H.67 No protein-ligand interaction detected (PLIP) PEO.6: 4 residues within 4Å: Chain E: Y.30, C.63, V.66, H.67 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:Y.30, E:Y.30 PEO.7: 3 residues within 4Å: Chain F: Y.30, C.63, H.67 No protein-ligand interaction detected (PLIP)

2 x LYS: LYSINE(Non-covalent)

LYS.2: 5 residues within 4Å: Chain B: Y.107, D.108, Q.109, F.110 Chain D: L.72 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain D, Hydrogen bonds: B:D.108 Hydrophobic interactions: D:L.72 LYS.5: 5 residues within 4Å: Chain B: L.72 Chain D: Y.107, D.108, Q.109, F.110 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:Y.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ki, N. et al., Crystal structure of the putative HOCl and HOSCN-responsive peroxiredoxin RclX from Pseudomonas aeruginosa. To Be Published

Release Date

2023-07-05

Peptides

CMD domain-containing protein: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

CMD domain-containing protein