SMTL ID : 7ye2.1

The cryo-EM structure of C. crescentus GcrA-TACdown

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-1-1-1-1-mer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain D: C.810, C.884, E.885, C.891, C.894 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:C.810, D:C.884, D:C.894 ZN.2: 5 residues within 4Å: Chain D: C.71, L.72, C.73, C.86, C.89 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.71, D:L.72, D:C.73, D:C.86 ZN.4: 5 residues within 4Å: Chain I: C.118, W.120, C.133, C.143, H.146 4 PLIP interactions: 4 interactions with chain I Metal complexes: I:C.118, I:C.133, I:C.143, I:H.146

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 5 residues within 4Å: Chain D: A.461, D.462, F.463, D.464, D.466 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:D.464, D:D.466

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, X.X. et al., Cryo-EM structures of Caulobacter crescentus transcription activation complex with an essential cell cycle regulator GcrA. Nucleic Acids Res. (2023)

Release Date

2023-01-18

Peptides

DNA-directed RNA polymerase subunit alpha: AB
DNA-directed RNA polymerase subunit beta: C
DNA-directed RNA polymerase subunit beta': D
DNA-directed RNA polymerase subunit omega: E
RNA polymerase sigma factor RpoD: F
Cell cycle regulatory protein GcrA: I

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

I
G

DNA-directed RNA polymerase subunit alpha

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase subunit beta'

DNA-directed RNA polymerase subunit omega

RNA polymerase sigma factor RpoD

Cell cycle regulatory protein GcrA

Related Entries With Identical Sequence