SMTL ID : 7yf2.1

Crystal structure of METTL9 in complex with unmethylated SLC39A5 peptide and SAH

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

hetero-2-2-mer

Ligands

2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 16 residues within 4Å: Chain A: T.72, M.83, G.110, G.112, V.116, T.130, E.131, L.132, I.150, L.166, N.167, L.168, R.171, C.172, Y.252 Chain B: H.7 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.112, A:L.132, A:L.166, A:Y.252 Water bridges: A:L.166, A:D.173, A:E.206, A:E.206 SAH.2: 15 residues within 4Å: Chain C: T.72, M.83, G.110, G.112, V.116, T.130, E.131, L.132, I.150, L.166, N.167, L.168, R.171, Y.252 Chain D: H.7 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:L.132, C:L.166, C:Y.252 Water bridges: C:T.72, C:L.166, C:E.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, X. et al., Molecular basis for METTL9-mediated N1-histidine methylation. Cell Discov (2023)

Release Date

2023-04-12

Peptides

Protein-L-histidine N-pros-methyltransferase: AC
SLC39A5 peptide: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
B

B
C

D
D

Protein-L-histidine N-pros-methyltransferase

SLC39A5 peptide

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