SMTL ID : 7yh7.1

SARS-CoV-2 spike in complex with neutralizing antibody NIV-8 (state 2)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-3-mer
Ligands
8 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)
27 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Moriyama, S. et al., Structural delineation and computational design of SARS-CoV-2-neutralizing antibodies against Omicron subvariants. Nat Commun (2023)
Release Date
2023-07-19
Peptides
Spike glycoprotein: ABC
NIV-8 Fab light chain: DFH
NIV-8 Fab heavy chain: EGI
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
Q
F
R
H
U
E
P
G
S
I
V

Spike glycoprotein

NIV-8 Fab light chain

Toggle Identical (DFH)

NIV-8 Fab heavy chain

Toggle Identical (EGI)

Related Entries With Identical Sequence

7yh6.1