SMTL ID : 7yqn.2 (1 other biounit)

Crystal structure of Ecoli malate synthase G

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: L.471, R.472, Q.475, W.587 Ligands: GOL.6 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: R.338, K.392, E.427, D.455 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.338, A:D.455 Water bridges: A:E.427, A:D.455

1 x BME: BETA-MERCAPTOETHANOL(Non-functional Binders)

BME.3: 5 residues within 4Å: Chain A: V.118, S.274, C.617, S.618, E.630 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.118

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 5 residues within 4Å: Chain A: W.169, R.172, F.173, E.176, Y.519 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:W.169, A:R.172, A:Y.519 GOL.5: 3 residues within 4Å: Chain A: Y.519, H.547, Q.550 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.519, A:H.547 Water bridges: A:R.527, A:R.527, A:R.527, A:R.527 GOL.6: 7 residues within 4Å: Chain A: L.471, A.582, N.584, A.585, N.586, W.587 Ligands: CL.1 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.586, A:N.586

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ho, M.R. et al., Cryo-EM reveals the structure and dynamics of a 723-residue malate synthase G. J.Struct.Biol. (2023)

Release Date

2023-03-29

Peptides

Malate synthase G: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Malate synthase G

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