SMTL ID : 7yrq.1

Cryo-EM structure of human Peroxisomal ABC Transporter ABCD1

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

2 x K9G: [(2~{R})-1-hexadecanoyloxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propan-2-yl] octadec-9-enoate(Non-covalent)

K9G.1: 9 residues within 4Å: Chain A: S.226, L.249, M.335, K.336, W.339, S.340, G.343, L.392, A.396 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:L.249 K9G.2: 8 residues within 4Å: Chain B: S.226, M.335, K.336, W.339, S.340, G.343, L.392, A.396 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiong, C. et al., Structural insights into substrate recognition and translocation of human peroxisomal ABC transporter ALDP. Signal Transduct Target Ther (2023)

Release Date

2023-03-22

Peptides

ATP-binding cassette sub-family D member 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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ATP-binding cassette sub-family D member 1

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