- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY 2.90 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x PHE- MET- ARG- NFA: Phe-Met-Arg-Phe-amide(Non-covalent)
- 12 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG-NAG.4: 5 residues within 4Å:- Chain A: N.393, G.396, Y.398, K.399, M.400
No protein-ligand interaction detected (PLIP)NAG-NAG.5: 5 residues within 4Å:- Chain A: N.331, G.430, C.431, Y.432
- Chain B: S.131
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:S.131, B:S.131
NAG-NAG.6: 4 residues within 4Å:- Chain A: N.169, Q.172, T.173, R.391
No protein-ligand interaction detected (PLIP)NAG-NAG.7: 4 residues within 4Å:- Chain A: F.212, N.221, R.242, L.245
No protein-ligand interaction detected (PLIP)NAG-NAG.8: 5 residues within 4Å:- Chain B: N.393, G.396, Y.398, K.399, M.400
No protein-ligand interaction detected (PLIP)NAG-NAG.9: 5 residues within 4Å:- Chain B: N.331, G.430, C.431, Y.432
- Chain C: S.131
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:S.131, C:S.131
NAG-NAG.10: 4 residues within 4Å:- Chain B: N.169, Q.172, T.173, R.391
No protein-ligand interaction detected (PLIP)NAG-NAG.11: 4 residues within 4Å:- Chain B: F.212, N.221, R.242, L.245
No protein-ligand interaction detected (PLIP)NAG-NAG.12: 5 residues within 4Å:- Chain C: N.393, G.396, Y.398, K.399, M.400
No protein-ligand interaction detected (PLIP)NAG-NAG.13: 5 residues within 4Å:- Chain A: S.131
- Chain C: N.331, G.430, C.431, Y.432
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:S.131, A:S.131
NAG-NAG.14: 4 residues within 4Å:- Chain C: N.169, Q.172, T.173, R.391
No protein-ligand interaction detected (PLIP)NAG-NAG.15: 4 residues within 4Å:- Chain C: F.212, N.221, R.242, L.245
No protein-ligand interaction detected (PLIP)- 6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.16: 2 residues within 4Å:- Chain A: H.175, N.401
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.401
NAG.17: 2 residues within 4Å:- Chain A: E.376, N.377
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:E.376, A:N.377
NAG.18: 2 residues within 4Å:- Chain B: E.376, N.377
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.376, B:N.377
NAG.19: 2 residues within 4Å:- Chain B: H.175, N.401
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.401
NAG.20: 2 residues within 4Å:- Chain C: E.376, N.377
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:E.376, C:N.377
NAG.21: 2 residues within 4Å:- Chain C: H.175, N.401
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.401
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Liu, F. et al., Structure and mechanism of a neuropeptide-activated channel in the ENaC/DEG superfamily. Nat.Chem.Biol. (2023)
- Release Date
- 2023-08-09
- Peptides
- FMRFamide-gated Na+ channel: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY 2.90 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x PHE- MET- ARG- NFA: Phe-Met-Arg-Phe-amide(Non-covalent)
- 12 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Liu, F. et al., Structure and mechanism of a neuropeptide-activated channel in the ENaC/DEG superfamily. Nat.Chem.Biol. (2023)
- Release Date
- 2023-08-09
- Peptides
- FMRFamide-gated Na+ channel: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C - Membrane
-
We predict this structure to be a membrane protein.