SMTL ID : 7yyk.1

Crystal structure of the O-fucosylated form of TSRs1-3 from the human thrombospondin 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

2 x FUC: alpha-L-fucopyranose(Post Translational Modification)

FUC.1: 2 residues within 4Å: Chain A: T.73, C.74 No protein-ligand interaction detected (PLIP) FUC.2: 2 residues within 4Å: Chain A: T.130, C.131 No protein-ligand interaction detected (PLIP)

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 2 residues within 4Å: Chain A: W.64, R.81 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Berardinelli, S.J. et al., O-fucosylation stabilizes the TSR3 motif in thrombospondin-1 by interacting with nearby amino acids and protecting a disulfide bond. J.Biol.Chem. (2022)

Release Date

2022-05-25

Peptides

Thrombospondin-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Thrombospondin-1