SMTL ID : 7z0l.1

IL-27 signalling complex

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

5 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)

NAG-NAG.1: 5 residues within 4Å: Chain A: G.14, S.15, N.16, T.65, D.66 No protein-ligand interaction detected (PLIP) NAG-NAG.2: 6 residues within 4Å: Chain A: N.34, A.35, S.36, Y.37, V.54, R.57 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 5 residues within 4Å: Chain A: N.104, L.105, T.106, Q.118, D.120 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 11 residues within 4Å: Chain B: H.98, F.100, S.101, T.102, V.103, L.305, N.311, V.312, S.313, L.314, T.315 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:T.315 Hydrogen bonds: B:S.313 NAG-NAG.5: 6 residues within 4Å: Chain C: V.34, N.41, S.43, S.78, W.79, T.81 No protein-ligand interaction detected (PLIP)

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.6: 4 residues within 4Å: Chain A: E.128, N.130, Q.146, E.172 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:E.128 NAG.7: 3 residues within 4Å: Chain A: Y.197, N.198, V.216 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jin, Y. et al., Structural insights into the assembly and activation of the IL-27 signaling complex. Embo Rep. (2022)

Release Date

2022-07-27

Peptides

Interleukin-6 receptor subunit beta: A
Interleukin-27 subunit beta,Interleukin-27 subunit alpha: B
Interleukin-27 receptor subunit alpha: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Interleukin-6 receptor subunit beta

Interleukin-27 subunit beta,Interleukin-27 subunit alpha

Interleukin-27 receptor subunit alpha