SMTL ID : 7z1s.1

X-ray crystal structure of SLPYL1-NIO complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-dimer

Ligands

2 x NIO: NICOTINIC ACID(Non-covalent)

NIO.1: 9 residues within 4Å: Chain A: K.95, F.144, E.150, L.153, Y.156, F.195, A.196, V.199, V.200 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.156, A:V.199, A:V.200 Water bridges: A:Y.156, A:Y.156, A:N.203, A:N.203 Salt bridges: A:K.95 NIO.3: 9 residues within 4Å: Chain B: K.95, F.144, E.150, L.153, Y.156, F.195, A.196, V.199, V.200 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:Y.156, B:V.199, B:V.200 Water bridges: B:Y.156, B:E.177, B:N.203, B:N.203 Salt bridges: B:K.95

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: E.48, G.164, F.165, E.166, R.167 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.166, A:E.166, A:E.166, A:R.167 GOL.4: 5 residues within 4Å: Chain B: E.48, G.164, F.165, E.166, R.167 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:E.166, B:E.166, B:E.166, B:R.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Infantes, L. et al., Structure-Based Modulation of the Ligand Sensitivity of a Tomato Dimeric Abscisic Acid Receptor Through a Glu to Asp Mutation in the Latch Loop. Front Plant Sci (2022)

Release Date

2022-07-13

Peptides

SlPYL1-NIO: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

SlPYL1-NIO

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