SMTL ID : 7z3w.1

Crystal structure of the AAL160 Fab

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

7 x ETE: 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL(Non-covalent)

ETE.1: 8 residues within 4Å: Chain A: V.11, K.12, K.13, E.16, A.119, S.120, T.121, F.151 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:V.11, A:K.13, A:T.121 Water bridges: A:K.13, A:K.13 ETE.2: 7 residues within 4Å: Chain A: S.31, Y.32, W.33, Y.99, T.100, N.101, W.102 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.33, A:N.101 ETE.3: 6 residues within 4Å: Chain A: K.122, G.123, P.124, S.125, D.149, L.180 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.122, A:G.123 ETE.4: 7 residues within 4Å: Chain A: M.40, G.42, K.43, G.44, E.46 Chain B: Q.100 Ligands: ETE.6 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.43, A:K.43, A:G.44 ETE.5: 8 residues within 4Å: Chain A: Y.99, N.101, D.103 Chain B: S.30, S.31, Y.32, R.91, N.93 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.91, B:R.91 ETE.6: 11 residues within 4Å: Chain A: G.42, K.43, G.44 Chain B: A.9, T.10, Y.87, Q.100, G.101, K.103, R.142 Ligands: ETE.4 1 PLIP interactions: 1 interactions with chain B Water bridges: B:Y.87 ETE.7: 5 residues within 4Å: Chain B: L.154, Q.155, S.156, N.158, H.189 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.155, B:S.156

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fischman, S. et al., Redirecting an anti-IL-1 beta antibody to bind a new, unrelated and computationally predicted epitope on hIL-17A". Commun Biol (2023)

Release Date

2023-02-08

Peptides

AAL160 Fab heavy-chain: A
AAL160 Fab light-chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

AAL160 Fab heavy-chain

AAL160 Fab light-chain

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