SMTL ID : 7z4v.1

Structure of Serine-Threonine kinase STK25 in complex with compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.64 Å

Oligo State

monomer

Ligands

1 x IB5: ~{N}-(5-~{tert}-butyl-1~{H}-pyrazol-3-yl)-4-pyrrolidin-1-ylsulfonyl-benzamide(Non-covalent)

IB5.1: 14 residues within 4Å: Chain A: I.28, V.36, A.49, T.81, M.97, E.98, Y.99, L.100, G.102, G.103, D.107, L.108, L.149, Y.289 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.28, A:V.36, A:A.49, A:T.81, A:D.107, A:L.108, A:Y.289 Hydrogen bonds: A:E.98, A:L.100, A:L.100 Water bridges: A:Y.289, A:Y.289 Salt bridges: A:D.107

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 8 residues within 4Å: Chain A: N.217, L.220, V.225, L.228, I.229, N.232, S.233, P.235 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.217, A:N.232, A:S.233

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kiyeleko, S. et al., Targeting non-alcoholic fatty liver disease: Design, X-ray co-crystal structure and synthesis of 'first-in-kind' inhibitors of serine/threonine kinase25. Bioorg.Med.Chem.Lett. (2022)

Release Date

2022-04-06

Peptides

Serine/threonine-protein kinase 25: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase 25