SMTL ID : 7z52.1

Human NEXT dimer - focused reconstruction of the single MTR4

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x U- U- U- U- U: RNA (5'-R(P*UP*UP*UP*UP*U)-3')(Non-covalent)

U-U-U-U-U.1: 21 residues within 4Å: Chain A: P.194, I.195, K.196, E.234, R.266, F.398, S.399, K.400, G.461, T.486, E.487, T.488, F.508, D.509, G.510, F.513, E.920, N.921, R.999, R.1003, E.1006 Protein-ligand interaction information (PLIP) not available

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.2: 8 residues within 4Å: Chain A: F.142, I.143, D.145, T.167, G.170, T.172, N.494, R.531 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:I.143, A:D.145, A:T.172 pi-Stacking: A:F.142, A:F.142 pi-Cation interactions: A:R.531, A:R.531

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gerlach, P. et al., Structure and regulation of the nuclear exosome targeting complex guides RNA substrates to the exosome. Mol.Cell (2022)

Release Date

2022-06-22

Peptides

Exosome RNA helicase MTR4: A
Zinc finger CCHC domain-containing protein 8: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Exosome RNA helicase MTR4

Zinc finger CCHC domain-containing protein 8

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