SMTL ID : 7z6m.1

Crystal structure of Zn2+-transporter BbZIP in a cadmium bound state

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.51 Å

Oligo State

homo-dimer

Ligands

8 x CD: CADMIUM ION(Non-covalent)

CD.1: 3 residues within 4Å: Chain A: D.164, H.169, H.295 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.164, A:D.164, A:H.169 CD.2: 2 residues within 4Å: Chain A: L.244, R.248 No protein-ligand interaction detected (PLIP) CD.3: 5 residues within 4Å: Chain A: N.198, E.201, D.228, E.231, E.260 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.201, A:D.228, A:E.260 CD.4: 5 residues within 4Å: Chain A: M.119, H.197, E.201, Q.227, E.231 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.197, A:E.201, A:E.231, A:E.231 CD.5: 3 residues within 4Å: Chain B: D.164, H.169, H.295 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:D.164, B:D.164, B:H.169 CD.6: 2 residues within 4Å: Chain B: L.244, R.248 No protein-ligand interaction detected (PLIP) CD.7: 5 residues within 4Å: Chain B: N.198, E.201, D.228, E.231, E.260 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:E.201, B:D.228, B:E.260 CD.8: 5 residues within 4Å: Chain B: M.119, H.197, E.201, Q.227, E.231 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.197, B:E.201, B:E.231, B:E.231

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wiuf, A. et al., The two-domain elevator-type mechanism of zinc-transporting ZIP proteins. Sci Adv (2022)

Release Date

2022-08-10

Peptides

Putative membrane protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Putative membrane protein

Related Entries With Identical Sequence