SMTL ID : 7z75.1

PI3KC2a core in complex with PITCOIN3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

monomer

Ligands

1 x IG3: ~{N}-[4-[3-(methylsulfonylamino)phenyl]-1,3-thiazol-2-yl]-2-[4-oxidanylidene-3-(2-phenylethyl)pteridin-2-yl]sulfanyl-ethanamide(Non-covalent)

IG3.1: 15 residues within 4Å: Chain A: S.623, K.630, E.642, N.644, M.646, F.682, E.695, L.696, V.697, P.698, A.699, S.700, T.702, M.767, I.777 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:N.644, A:L.696, A:P.698, A:T.702 Hydrogen bonds: A:V.697, A:A.699, A:S.700 pi-Stacking: A:F.682

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: K.606, N.644, E.695 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.644

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 3 residues within 4Å: Chain A: N.428, K.430, N.433 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.428, A:N.433 Salt bridges: A:K.430

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lo, W.T. et al., Development of selective inhibitors of phosphatidylinositol 3-kinase C2 alpha. Nat.Chem.Biol. (2023)

Release Date

2022-08-31

Peptides

Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha

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