SMTL ID : 7zbh.1

ATP-dependent zinc metalloprotease FtsH (BB0789) from Borrelia burgdorferi

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

homo-hexamer

Ligands

6 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 14 residues within 4Å: Chain A: V.13, A.14, S.52, P.53, G.54, T.55, G.56, K.57, T.58, L.59, I.189, H.193, G.217, A.218 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:A.14, A:A.14, A:G.54, A:T.55, A:G.56, A:K.57, A:T.58, A:T.58, A:T.58, A:L.59, A:D.110 Salt bridges: A:K.57 ADP.3: 17 residues within 4Å: Chain B: V.13, A.14, S.52, P.53, G.54, T.55, G.56, K.57, T.58, L.59, D.110, N.157, I.189, H.193, G.217, A.218, A.221 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:A.14, B:A.14, B:G.54, B:T.55, B:G.56, B:K.57, B:T.58, B:T.58, B:T.58, B:L.59, B:N.157 Salt bridges: B:K.57 ADP.5: 15 residues within 4Å: Chain C: V.13, A.14, S.52, P.53, G.54, T.55, G.56, K.57, T.58, L.59, D.110, I.189, H.193, G.217, A.218 11 PLIP interactions: 11 interactions with chain C Hydrogen bonds: C:A.14, C:A.14, C:G.54, C:T.55, C:G.56, C:K.57, C:T.58, C:T.58, C:T.58, C:L.59 Salt bridges: C:K.57 ADP.7: 17 residues within 4Å: Chain D: V.13, A.14, S.52, P.53, G.54, T.55, G.56, K.57, T.58, L.59, D.110, N.157, I.189, H.193, G.217, A.218, A.221 13 PLIP interactions: 13 interactions with chain D Hydrogen bonds: D:A.14, D:A.14, D:G.54, D:T.55, D:G.56, D:K.57, D:T.58, D:T.58, D:T.58, D:L.59, D:D.110, D:N.157 Salt bridges: D:K.57 ADP.9: 15 residues within 4Å: Chain E: V.13, A.14, S.52, P.53, G.54, T.55, G.56, K.57, T.58, L.59, D.110, I.189, H.193, G.217, A.218 12 PLIP interactions: 12 interactions with chain E Hydrogen bonds: E:A.14, E:A.14, E:G.54, E:T.55, E:G.56, E:K.57, E:T.58, E:T.58, E:T.58, E:L.59, E:N.157 Salt bridges: E:K.57 ADP.11: 16 residues within 4Å: Chain F: V.13, A.14, S.52, P.53, G.54, T.55, G.56, K.57, T.58, L.59, D.110, N.157, I.189, H.193, G.217, A.218 13 PLIP interactions: 13 interactions with chain F Hydrogen bonds: F:A.14, F:A.14, F:G.54, F:T.55, F:G.56, F:K.57, F:T.58, F:T.58, F:T.58, F:L.59, F:N.157, F:A.218 Salt bridges: F:K.57

6 x ZN: ZINC ION(Non-covalent)

ZN.2: 3 residues within 4Å: Chain A: H.273, H.277, D.349 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.273, A:H.273, A:H.277, A:D.349, A:D.349 ZN.4: 3 residues within 4Å: Chain B: H.273, H.277, D.349 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.273, B:H.277, B:D.349 ZN.6: 3 residues within 4Å: Chain C: H.273, H.277, D.349 3 PLIP interactions: 3 interactions with chain C Metal complexes: C:H.273, C:H.277, C:D.349 ZN.8: 4 residues within 4Å: Chain D: H.273, E.274, H.277, D.349 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:H.273, D:H.277, D:D.349 ZN.10: 3 residues within 4Å: Chain E: H.273, H.277, D.349 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:H.273, E:H.277, E:D.349, E:D.349 ZN.12: 3 residues within 4Å: Chain F: H.273, H.277, D.349 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:H.273, F:D.349, F:D.349

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brangulis, K., ATP-dependent zinc metalloprotease FtsH (BB0789) from Borrelia burgdorferi. To be published

Release Date

2023-04-05

Peptides

ATP-dependent zinc metalloprotease FtsH: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
D

D
F

E
I

F
K

ATP-dependent zinc metalloprotease FtsH