SMTL ID : 7zcd.1

Mutant L39Y-L58F of recombinant bovine beta-lactoglobulin in complex with pramocaine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x PX9: Pramocaine(Non-covalent)

PX9.1: 14 residues within 4Å: Chain A: V.41, V.43, L.46, L.54, I.56, F.58, K.60, E.62, K.69, I.71, V.92, L.103, F.105, M.107 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.41, A:L.46, A:L.46, A:L.54, A:I.56, A:I.56, A:V.92, A:V.92, A:L.103, A:F.105, A:F.105 Hydrogen bonds: A:K.69 PX9.3: 14 residues within 4Å: Chain B: V.41, V.43, L.46, L.54, I.56, F.58, K.60, E.62, K.69, I.71, V.92, L.103, F.105, M.107 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:V.41, B:L.46, B:L.46, B:L.54, B:I.56, B:I.56, B:V.92, B:V.92, B:L.103, B:F.105, B:F.105 Hydrogen bonds: B:K.69

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: T.76, K.77 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.77 SO4.4: 2 residues within 4Å: Chain B: T.76, K.77 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.77 Water bridges: B:T.76

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bonarek, P. et al., beta-Lactoglobulin variants as potential carriers of pramoxine: Comprehensive structural and biophysical studies. J.Mol.Recognit. (2023)

Release Date

2023-04-05

Peptides

Beta-lactoglobulin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

B
AAA

Beta-lactoglobulin

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