SMTL ID : 7zet.2 (1 other biounit)

Crystal structure of human Clusterin, crystal form I

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: N.81, T.83, E.260, N.269 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.2: 3 residues within 4Å: Chain A: E.89, E.119, N.123 No protein-ligand interaction detected (PLIP)

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.3: 3 residues within 4Å: Chain A: E.60, D.61, N.64 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.61, A:D.61, A:D.61, A:N.64 NAG.4: 2 residues within 4Å: Chain A: N.244, T.246 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.246 NAG.5: 4 residues within 4Å: Chain A: W.303, K.304, L.306, N.307 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.304 NAG.6: 4 residues within 4Å: Chain A: N.320, S.323, R.324, N.327 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:R.324 Hydrogen bonds: A:S.323, A:N.327

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yuste-Checa, P. et al., Crystal structure of human Clusterin, crystal form I. To be published

Release Date

2023-10-11

Peptides

Clusterin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Clusterin

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