SMTL ID : 7zgb.1

Structure of yeast Sec14p with NPPM112

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x IUJ: 4-fluoranyl-~{N}-[(4-pyrrolidin-1-ylphenyl)methyl]benzamide(Non-covalent)

IUJ.1: 15 residues within 4Å: Chain A: Y.104, E.121, Y.148, V.151, V.152, S.170, T.172, M.174, V.191, A.194, S.198, Y.202, R.205, M.206, F.209 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:V.151, A:T.172, A:V.191, A:A.194, A:Y.202, A:R.205, A:F.209 Hydrogen bonds: A:S.170 pi-Stacking: A:Y.148 Halogen bonds: A:Y.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, X.R. et al., Mechanisms by which small molecules of diverse chemotypes arrest Sec14 lipid transfer activity. J.Biol.Chem. (2023)

Release Date

2023-01-25

Peptides

SEC14 cytosolic factor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

SEC14 cytosolic factor

Related Entries With Identical Sequence