SMTL ID : 7zgr.1

Polymerase module of yeast CPF in complex with Mpe1, the yPIM of Cft2 and the pre-cleaved CYC1 RNA

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain B: C.67, C.75, C.81, H.85 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.67, B:C.75, B:C.81, B:H.85 ZN.2: 5 residues within 4Å: Chain B: C.34, C.46, R.48, C.52, H.56 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.34, B:C.46, B:C.52, B:H.56

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rodriguez-Molina, J.B. et al., Mpe1 senses the binding of pre-mRNA and controls 3' end processing by CPF. Mol.Cell (2022)

Release Date

2022-05-25

Peptides

Protein CFT1: A
mRNA 3'-end-processing protein YTH1: B
Cleavage factor two protein 2: C
Polyadenylation factor subunit 2: D
MPE1 isoform 1: F

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

F
F

Protein CFT1

mRNA 3'-end-processing protein YTH1

Cleavage factor two protein 2

Polyadenylation factor subunit 2

MPE1 isoform 1

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