SMTL ID : 7zkf.1

Crystal Structure of human Brachyury G177D variant in complex with CF-5-86

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.49 Å

Oligo State

monomer

Ligands

1 x 01: N-(4-((2-fluorophenyl)(hydroxy)methyl)phenyl)acetamide

01.1: 6 residues within 4Å: Chain A: L.52, V.84, H.132, V.134, R.141, I.143 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.84, A:V.134, A:I.143, A:I.143 Hydrogen bonds: A:R.141 pi-Stacking: A:H.132

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 1 residues within 4Å: Chain A: K.64 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newman, J.A. et al., Structural insights into human brachyury DNA recognition and discovery of progressible binders for cancer therapy. Nat Commun (2025)

Release Date

2022-06-22

Peptides

T-box transcription factor T: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

T-box transcription factor T

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