SMTL ID : 7zmb.1

CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (state 2)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-2-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
17 x 3PE: 1,2-Distearoyl-sn-glycerophosphoethanolamine(Non-covalent)
8 x PC1: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE(Non-covalent)
5 x CDL: CARDIOLIPIN(Non-covalent)
3 x LMN: Lauryl Maltose Neopentyl Glycol(Non-covalent)
2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
6 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
1 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
1 x ZN: ZINC ION(Non-covalent)
2 x ZMP: S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate(Covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Laube, E. et al., Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum. Sci Adv (2022)
Release Date
2022-11-30
Peptides
NADH-ubiquinone oxidoreductase chain 1: A
NADH dehydrogenase subunit 2: B
NADH-ubiquinone oxidoreductase chain 3: C
NADH-ubiquinone oxidoreductase chain 4: D
NADH-ubiquinone oxidoreductase chain 5: E
NADH-ubiquinone oxidoreductase chain 6: F
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7: G
Subunit NDUFS5 of NADH-ubiquinone oxidoreductase (Complex I): H
NADH-ubiquinone oxidoreductase-like protein: I
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial: J
NADH-ubiquinone oxidoreductase 49 kDa subunit-like protein: K
Subunit NDUFA1 of NADH-ubiquinone oxidoreductase (Complex I): L
NADH dehydrogenase (Ubiquinone)-like protein: M
NADH-ubiquinone oxidoreductase-like protein: N
NADH-ubiquinone oxidoreductase 30.4 kDa subunit-like protein: O
Subunit NDUFV2 of NADH-ubiquinone oxidoreductase (Complex I): P
Oxidoreductase-like protein: Q
NADH-ubiquinone oxidoreductase-like protein: R
NADH-ubiquinone oxidoreductase-like protein: S
NADH-ubiquinone oxidoreductase chain 4L: T
NADH-ubiquinone oxidoreductase-like protein: U
Acyl carrier protein: VX
NADH-ubiquinone oxidoreductase B14 subunit-like protein: W
Complex I-B22: Y
Complex I-ESSS: Z
NADH-ubiquinone oxidoreductase: 0
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13: 1
NADH-ubiquinone oxidoreductase-like protein: 2
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial: 3
NADH-ubiquinone oxidoreductase-like protein: 4
NADH dehydrogenase (Ubiquinone)-like protein: 5
Subunit NDUFC2 of NADH-ubiquinone oxidoreductase (Complex I): 6
Subunit NDUFB3 of NADH-ubiquinone oxidoreductase (Complex I): 7
Subunit NDUFB10 of NADH-ubiquinone oxidoreductase (Complex I): 8
Subunit NDUFB2 of NADH-ubiquinone oxidoreductase (Complex I): 9
NADH dehydrogenase-like protein: a
Subunit NDUFA3 of NADH-ubiquinone oxidoreductase (Complex I): b
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit: c
Subunit NDUFB6 of NADH-ubiquinone oxidoreductase (Complex I): d
Subunit NDUFB4 of NADH-ubiquinone oxidoreductase (Complex I): e
Subunit NDUFB5 of NADH-ubiquinone oxidoreductase (Complex I): f
Oxidoreductase-like domain-containing protein: g
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
1
B
2
C
3
D
4
E
5
F
6
G
8
H
9
I
A
J
B
K
C
L
D
M
E
N
F
O
G
P
H
Q
I
R
J
S
K
T
L
U
M
V
O
X
Q
W
P
Y
R
Z
S
0
U
1
W
2
X
3
Y
4
Z
5
a
6
b
7
c
8
d
9
e
a
f
b
g
c
h
d
i
e
j
f
n
g
o
Membrane
We predict this structure to be a membrane protein.

NADH-ubiquinone oxidoreductase chain 1

NADH dehydrogenase subunit 2

NADH-ubiquinone oxidoreductase chain 3

NADH-ubiquinone oxidoreductase chain 4

NADH-ubiquinone oxidoreductase chain 5

NADH-ubiquinone oxidoreductase chain 6

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7

Subunit NDUFS5 of NADH-ubiquinone oxidoreductase (Complex I)

NADH-ubiquinone oxidoreductase-like protein

NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial

NADH-ubiquinone oxidoreductase 49 kDa subunit-like protein

Subunit NDUFA1 of NADH-ubiquinone oxidoreductase (Complex I)

NADH dehydrogenase (Ubiquinone)-like protein

NADH-ubiquinone oxidoreductase-like protein

NADH-ubiquinone oxidoreductase 30.4 kDa subunit-like protein

Subunit NDUFV2 of NADH-ubiquinone oxidoreductase (Complex I)

Oxidoreductase-like protein

NADH-ubiquinone oxidoreductase-like protein

NADH-ubiquinone oxidoreductase-like protein

NADH-ubiquinone oxidoreductase chain 4L

NADH-ubiquinone oxidoreductase-like protein

Acyl carrier protein

NADH-ubiquinone oxidoreductase B14 subunit-like protein

Complex I-B22

Complex I-ESSS

NADH-ubiquinone oxidoreductase

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13

NADH-ubiquinone oxidoreductase-like protein

NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial

NADH-ubiquinone oxidoreductase-like protein

NADH dehydrogenase (Ubiquinone)-like protein

Subunit NDUFC2 of NADH-ubiquinone oxidoreductase (Complex I)

Subunit NDUFB3 of NADH-ubiquinone oxidoreductase (Complex I)

Subunit NDUFB10 of NADH-ubiquinone oxidoreductase (Complex I)

Subunit NDUFB2 of NADH-ubiquinone oxidoreductase (Complex I)

NADH dehydrogenase-like protein

Subunit NDUFA3 of NADH-ubiquinone oxidoreductase (Complex I)

NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit

Subunit NDUFB6 of NADH-ubiquinone oxidoreductase (Complex I)

Subunit NDUFB4 of NADH-ubiquinone oxidoreductase (Complex I)

Subunit NDUFB5 of NADH-ubiquinone oxidoreductase (Complex I)

Oxidoreductase-like domain-containing protein

Related Entries With Identical Sequence

7zm7.1 | 7zm8.1 | 7zme.1 | 7zmg.1 | 7zmh.1