SMTL ID : 7znk.1

Structure of an endogenous human TREX complex bound to mRNA

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-4-4-4-4-4-4-4-2-mer

Ligands

2 x U- U- U: RNA(Non-covalent)

U-U-U.1: 11 residues within 4Å: Chain O: H.121, T.122, R.123, F.149, G.150, G.151, T.172, P.173, G.174, R.175, D.206 Protein-ligand interaction information (PLIP) not available U-U-U.2: 11 residues within 4Å: Chain 3: H.121, T.122, R.123, F.149, G.150, G.151, T.172, P.173, G.174, R.175, D.206 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pacheco-Fiallos, B. et al., mRNA recognition and packaging by the human transcription-export complex. Nature (2023)

Release Date

2023-05-03

Peptides

THO complex subunit 1: AHPW
THO complex subunit 2: BIQX
THO complex subunit 3: CJRY
THO complex subunit 5 homolog: DLS0
THO complex subunit 6 homolog: EMT1
THO complex subunit 7 homolog: FNU2
Spliceosome RNA helicase DDX39B: GOV3
THO complex subunit 4: KZ

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

H
I

P
a

W
i

B
B

I
J

Q
b

X
j

C
C

J
K

R
c

Y
k

D
E

L
M

S
e

0
m

E
F

M
N

T
f

1
n

F
G

N
O

U
g

2
o

G
H

O
P

V
h

3
p

K
L

Z
l

THO complex subunit 1

THO complex subunit 2

THO complex subunit 3

THO complex subunit 5 homolog

THO complex subunit 6 homolog

THO complex subunit 7 homolog

Spliceosome RNA helicase DDX39B

THO complex subunit 4

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