SMTL ID : 7zqt.2 (1 other biounit)

Helicobacter pylori adhesin BabA bound to neutralising human antibody.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: N.122, Q.162, T.163, G.410 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.122

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: G.189, E.190, G.191, N.192, Q.205 Chain C: L.31, W.102 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.191, A:N.192, A:Q.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Remaut, H., Helicobacter pylori adhesin BabA bound to neutralising human antibody. To Be Published

Release Date

2023-05-17

Peptides

Adhesin binding fucosylated histo-blood group antigen: A
Nanobody Nb19: B
VH domain human IgG antibody ABbA: C
VL domain human IgG antibody ABbA: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

Adhesin binding fucosylated histo-blood group antigen

Nanobody Nb19

VH domain human IgG antibody ABbA

VL domain human IgG antibody ABbA

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