SMTL ID : 7zry.1

Structure of the 2a splicing variant of the full-length human LSD1 bound to CoREST (delta305)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 36 residues within 4Å: Chain A: G.305, S.306, G.307, V.308, S.309, L.327, E.328, A.329, R.330, G.334, G.335, R.336, L.349, G.350, A.351, M.352, V.353, T.608, A.609, V.610, T.644, L.645, P.646, V.649, V.657, L.679, W.771, W.776, S.780, Y.781, G.820, E.821, A.829, T.830, V.831, A.834 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:L.679, A:Y.781 Hydrogen bonds: A:S.306, A:G.307, A:S.309, A:S.309, A:A.329, A:R.330, A:G.334, A:R.336, A:M.352, A:V.353, A:V.353, A:V.610, A:V.610, A:E.821, A:A.829, A:V.831 Salt bridges: A:R.336, A:R.336

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Astro, V. et al., Fine-tuned KDM1A alternative splicing regulates human cardiomyogenesis through an enzymatic-independent mechanism. Iscience (2022)

Release Date

2022-08-03

Peptides

Isoform of Lysine-specific histone demethylase 1A: A
REST corepressor 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Isoform of Lysine-specific histone demethylase 1A

REST corepressor 1

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