SMTL ID : 7zu4.1 (1 other biounit)

Crystal Structure of Human Parechovirus 1 2A protein lacking the C-terminal oligomerisation helix

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.86, H.88, H.112 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.86 Salt bridges: A:H.88, A:H.112 SO4.2: 2 residues within 4Å: Chain A: K.94, Q.113 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.113 Salt bridges: A:K.94 SO4.3: 5 residues within 4Å: Chain A: Q.11, V.32, G.33, D.34, H.35 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.32, A:D.34 Salt bridges: A:H.35

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 4 residues within 4Å: Chain A: K.52, A.53, K.54, I.89 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.52 Water bridges: A:K.54, A:K.54

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 5 residues within 4Å: Chain A: H.88, I.89, F.90, S.91, H.112 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.91, A:S.91, A:H.112 GOL.6: 4 residues within 4Å: Chain A: R.13, R.76, I.77, K.78 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.13, A:I.77, A:K.78

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

von Castelmur, E. et al., Human Parechovirus 1 2A protein. To Be Published

Release Date

2023-05-24

Peptides

Protein 2A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein 2A

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