- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.57 Å
- Oligo State
- monomer
- Ligands
- 1 x K2O: 6-azido-N-[(2R)-1-oxidanylidene-1-[[(2S,3R)-3-oxidanyl-1-oxidanylidene-butan-2-yl]amino]propan-2-yl]hexanamide(Covalent)
- 25 x CL: CHLORIDE ION(Non-functional Binders)
CL.2: 4 residues within 4Å:- Chain A: T.652, G.653, T.654
- Ligands: K2O.1
Ligand excluded by PLIPCL.3: 3 residues within 4Å:- Chain A: V.533, V.535, K.536
Ligand excluded by PLIPCL.4: 3 residues within 4Å:- Chain A: R.456, S.457, N.660
Ligand excluded by PLIPCL.5: 2 residues within 4Å:- Chain A: I.772, G.773
Ligand excluded by PLIPCL.6: 3 residues within 4Å:- Chain A: N.759, K.760, S.761
Ligand excluded by PLIPCL.7: 3 residues within 4Å:- Chain A: I.394, D.395, Q.396
Ligand excluded by PLIPCL.8: 3 residues within 4Å:- Chain A: S.726, E.727, K.735
Ligand excluded by PLIPCL.9: 4 residues within 4Å:- Chain A: A.591, A.592, D.593, R.595
Ligand excluded by PLIPCL.10: 1 residues within 4Å:- Chain A: R.529
Ligand excluded by PLIPCL.11: 4 residues within 4Å:- Chain A: Y.544, E.545, V.562, Q.566
Ligand excluded by PLIPCL.12: 4 residues within 4Å:- Chain A: H.584, V.585, I.586
- Ligands: DMS.27
Ligand excluded by PLIPCL.13: 5 residues within 4Å:- Chain A: D.337, Y.338, L.339, H.399, Q.403
Ligand excluded by PLIPCL.14: 2 residues within 4Å:- Chain A: S.609, K.610
Ligand excluded by PLIPCL.15: 2 residues within 4Å:- Chain A: T.631, S.634
Ligand excluded by PLIPCL.16: 3 residues within 4Å:- Chain A: E.511, N.514, Y.515
Ligand excluded by PLIPCL.17: 3 residues within 4Å:- Chain A: S.775, D.776, A.777
Ligand excluded by PLIPCL.18: 1 residues within 4Å:- Chain A: R.358
Ligand excluded by PLIPCL.19: 4 residues within 4Å:- Chain A: Y.338, F.341, T.342, N.449
Ligand excluded by PLIPCL.20: 3 residues within 4Å:- Chain A: H.678, D.679, D.680
Ligand excluded by PLIPCL.21: 4 residues within 4Å:- Chain A: F.452, T.563, A.565, K.583
Ligand excluded by PLIPCL.22: 3 residues within 4Å:- Chain A: S.625, R.627, K.633
Ligand excluded by PLIPCL.23: 2 residues within 4Å:- Chain A: A.718, L.719
Ligand excluded by PLIPCL.24: 2 residues within 4Å:- Chain A: T.488, N.489
Ligand excluded by PLIPCL.25: 5 residues within 4Å:- Chain A: T.655, G.656, Q.657, D.658, E.659
Ligand excluded by PLIPCL.26: 2 residues within 4Å:- Chain A: Y.498
- Ligands: K2O.1
Ligand excluded by PLIP- 1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Flanders, P.L. et al., Combined Structural Analysis and Molecular Dynamics Reveal Penicillin-Binding Protein Inhibition Mode with beta-Lactones. Acs Chem.Biol. (2022)
- Release Date
- 2022-11-02
- Peptides
- Penicillin-binding protein 1b: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AAA
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.57 Å
- Oligo State
- monomer
- Ligands
- 1 x K2O: 6-azido-N-[(2R)-1-oxidanylidene-1-[[(2S,3R)-3-oxidanyl-1-oxidanylidene-butan-2-yl]amino]propan-2-yl]hexanamide(Covalent)
- 25 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Flanders, P.L. et al., Combined Structural Analysis and Molecular Dynamics Reveal Penicillin-Binding Protein Inhibition Mode with beta-Lactones. Acs Chem.Biol. (2022)
- Release Date
- 2022-11-02
- Peptides
- Penicillin-binding protein 1b: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AAA