SMTL ID : 7zvr.1

Crystal structure of the carotenoid-binding protein domain from silkworm Bombyx mori (BmCBP) complexed with zeaxanthin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ZEX: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol(Non-covalent)

ZEX.1: 12 residues within 4Å: Chain A: Q.122, F.137, R.141, S.162, S.163, G.164, N.183, G.186, C.187, W.188, W.210, V.232 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.137, A:F.137, A:W.188, A:V.232 Hydrogen bonds: A:R.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sluchanko, N.N. et al., Structural basis for the carotenoid binding and transport function of a START domain. Structure (2022)

Release Date

2022-10-26

Peptides

Carotenoid-binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carotenoid-binding protein

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