- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.68 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
FES.2: 12 residues within 4Å:- Chain A: C.39, F.41, G.42, C.47, R.57
- Chain B: C.39, C.47, R.49, P.55
- Ligands: PEG.6, FES.8, PEG.12
2 PLIP interactions:2 interactions with chain A,- Metal complexes: A:C.39, A:C.47
FES.8: 12 residues within 4Å:- Chain A: C.39, C.47, R.49, P.55
- Chain B: C.39, F.41, G.42, C.47, R.57
- Ligands: FES.2, PEG.6, PEG.12
2 PLIP interactions:2 interactions with chain B,- Metal complexes: B:C.39, B:C.47
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 4 residues within 4Å:- Chain A: T.9, R.11, R.462, H.484
3 PLIP interactions:3 interactions with chain A- Water bridges: A:T.9, A:H.484
- Salt bridges: A:H.484
SO4.10: 4 residues within 4Å:- Chain B: T.9, R.11, R.462, H.484
3 PLIP interactions:3 interactions with chain B- Water bridges: B:T.9, B:H.484
- Salt bridges: B:H.484
- 4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.5: 6 residues within 4Å:- Chain A: C.39, G.40, F.41, T.44, P.60
- Ligands: PEG.6
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:G.40
PEG.6: 11 residues within 4Å:- Chain A: P.37, Q.38, C.39, G.40, F.41
- Chain B: F.41, R.57
- Ligands: FES.2, PEG.5, FES.8, PEG.12
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:G.40
PEG.11: 6 residues within 4Å:- Chain B: C.39, G.40, F.41, T.44, P.60
- Ligands: PEG.12
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:G.40
PEG.12: 11 residues within 4Å:- Chain A: F.41, R.57
- Chain B: P.37, Q.38, C.39, G.40, F.41
- Ligands: FES.2, PEG.6, FES.8, PEG.11
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:G.40
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Basak, Y. et al., Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix. Acs Catalysis (2022)
- Release Date
- 2023-03-15
- Peptides
- Carbon monoxide dehydrogenase 2: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
XB
X
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.68 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
- 2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Basak, Y. et al., Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix. Acs Catalysis (2022)
- Release Date
- 2023-03-15
- Peptides
- Carbon monoxide dehydrogenase 2: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
XB
X