- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.81 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x KBO: 2-ethyl-2-methanoyl-~{N}-[3-[[4-(quinolin-8-ylmethyl)piperazin-1-yl]methyl]phenyl]butanamide(Covalent)
- 24 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 4 residues within 4Å:- Chain A: D.13, R.16, S.17, H.20
Ligand excluded by PLIPEDO.3: 6 residues within 4Å:- Chain A: E.260, V.261, D.262, K.295, I.296, A.297
Ligand excluded by PLIPEDO.4: 5 residues within 4Å:- Chain A: P.294, K.295, I.296, V.330, E.331
Ligand excluded by PLIPEDO.5: 5 residues within 4Å:- Chain A: S.264, E.265, V.266, E.267, R.285
Ligand excluded by PLIPEDO.6: 7 residues within 4Å:- Chain A: H.270
- Chain B: P.272, R.279, K.280, T.281, F.787
- Ligands: EDO.7
Ligand excluded by PLIPEDO.7: 6 residues within 4Å:- Chain A: P.272, R.279, K.280, T.281
- Chain B: H.270
- Ligands: EDO.6
Ligand excluded by PLIPEDO.8: 5 residues within 4Å:- Chain A: D.406, I.407, F.408, K.484, I.485
Ligand excluded by PLIPEDO.9: 5 residues within 4Å:- Chain A: F.5, H.610, S.650, L.651, G.652
Ligand excluded by PLIPEDO.10: 7 residues within 4Å:- Chain A: M.605, Y.607, L.632, K.638, Y.642, L.645, V.657
Ligand excluded by PLIPEDO.11: 5 residues within 4Å:- Chain A: R.644, W.710, S.822, I.823, Y.832
Ligand excluded by PLIPEDO.12: 6 residues within 4Å:- Chain A: V.330, F.349, L.350, D.351, W.356, Q.358
Ligand excluded by PLIPEDO.14: 6 residues within 4Å:- Chain A: P.810, Y.811
- Chain B: W.12, Q.814, H.831, T.835
Ligand excluded by PLIPEDO.16: 6 residues within 4Å:- Chain B: K.218, E.260, V.261, D.262, K.295, A.297
Ligand excluded by PLIPEDO.17: 7 residues within 4Å:- Chain B: N.293, P.294, K.295, I.296, V.330, E.331
- Ligands: EDO.19
Ligand excluded by PLIPEDO.18: 5 residues within 4Å:- Chain B: D.406, I.407, F.408, K.484, I.485
Ligand excluded by PLIPEDO.19: 5 residues within 4Å:- Chain B: K.292, N.293, E.331, R.352
- Ligands: EDO.17
Ligand excluded by PLIPEDO.20: 4 residues within 4Å:- Chain B: S.264, E.265, V.266, R.285
Ligand excluded by PLIPEDO.21: 8 residues within 4Å:- Chain B: K.329, V.330, F.349, L.350, D.351, W.356, L.357, Q.358
Ligand excluded by PLIPEDO.22: 7 residues within 4Å:- Chain B: M.605, Y.607, L.632, K.638, Y.642, L.645, V.657
Ligand excluded by PLIPEDO.23: 8 residues within 4Å:- Chain B: L.702, S.703, P.725, Q.726, V.727, F.728, K.729, R.780
Ligand excluded by PLIPEDO.24: 5 residues within 4Å:- Chain B: R.644, W.710, S.822, I.823, Y.832
Ligand excluded by PLIPEDO.25: 6 residues within 4Å:- Chain A: W.12, Q.814, H.831, T.835
- Chain B: P.810, Y.811
Ligand excluded by PLIPEDO.27: 3 residues within 4Å:- Chain B: P.274, L.788, N.818
Ligand excluded by PLIPEDO.28: 4 residues within 4Å:- Chain B: R.521, L.522, T.523, P.570
Ligand excluded by PLIP- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Carvalho, L.A.R. et al., Chemoproteomics-Enabled Identification of 4-Oxo-beta-Lactams as Inhibitors of Dipeptidyl Peptidases 8 and 9. Angew.Chem.Int.Ed.Engl. (2022)
- Release Date
- 2022-09-28
- Peptides
- Dipeptidyl peptidase 9: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.81 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x KBO: 2-ethyl-2-methanoyl-~{N}-[3-[[4-(quinolin-8-ylmethyl)piperazin-1-yl]methyl]phenyl]butanamide(Covalent)
- 24 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Carvalho, L.A.R. et al., Chemoproteomics-Enabled Identification of 4-Oxo-beta-Lactams as Inhibitors of Dipeptidyl Peptidases 8 and 9. Angew.Chem.Int.Ed.Engl. (2022)
- Release Date
- 2022-09-28
- Peptides
- Dipeptidyl peptidase 9: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
D