SMTL ID : 7zzi.1 (1 other biounit)

Plasmodium falciparum hexokinase complexed with glucose and citrate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x GLC: alpha-D-glucopyranose(Non-covalent)

GLC.1: 14 residues within 4Å: Chain A: S.183, F.184, P.185, T.200, K.201, N.240, D.241, I.265, G.269, S.270, N.271, E.292, Q.319, E.322 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:T.200, A:K.201, A:N.240, A:N.240, A:D.241, A:G.269, A:N.271, A:E.292, A:E.292, A:Q.319 Salt bridges: A:K.201

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 9 residues within 4Å: Chain A: G.104, G.105, T.106, N.107, G.267, T.268, G.435, S.436, K.440 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:G.104, A:T.106, A:N.107, A:N.107, A:T.268, A:T.268, A:S.436, A:S.436, A:S.436, A:S.436 Salt bridges: A:K.440 CIT.4: 5 residues within 4Å: Chain A: I.305, V.308, Y.312, R.336, N.340 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.308 Hydrogen bonds: A:Y.312, A:Y.312, A:N.340 Salt bridges: A:R.336

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 2 residues within 4Å: Chain A: L.71, W.72 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.72, A:W.72 EDO.5: 2 residues within 4Å: Chain A: N.357, E.359 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.357, A:S.358, A:E.359

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dillenberger, M. et al., Structural Analysis of Plasmodium falciparum Hexokinase Provides Novel Information about Catalysis Due to a Plasmodium -Specific Insertion. Int J Mol Sci (2023)

Release Date

2023-08-30

Peptides

Phosphotransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphotransferase

Related Entries With Identical Sequence