SMTL ID : 8a0n.1

Crystal structure of Candida auris dihydrofolate reductase complexed with NADPH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 24 residues within 4Å: Chain A: V.20, A.21, I.29, G.30, G.33, S.34, L.35, G.64, R.65, K.66, T.67, L.86, S.87, R.88, K.89, S.103, I.130, G.131, G.132, S.133, Q.134, I.135, Y.136, L.138 27 PLIP interactions: 27 interactions with chain A Hydrogen bonds: A:A.21, A:A.21, A:G.64, A:R.65, A:R.65, A:K.66, A:K.66, A:T.67, A:R.88, A:G.131, A:G.132, A:S.133, A:Q.134, A:Q.134, A:I.135, A:Y.136 Water bridges: A:R.65, A:K.66, A:R.88, A:R.88, A:S.133, A:S.133 Salt bridges: A:R.65, A:R.88, A:K.89 pi-Stacking: A:Y.136 pi-Cation interactions: A:R.88

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 9 residues within 4Å: Chain A: L.23, Q.24, P.25, S.26, M.27, G.28, K.162, M.165, F.168 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.28, A:K.162, A:K.162 Water bridges: A:M.165 EDO.3: 6 residues within 4Å: Chain A: R.178, L.179, E.180, H.181, L.184, Y.206 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.178, A:L.179, A:Y.206 Water bridges: A:H.181, A:E.205, A:E.205

1 x NO3: NITRATE ION(Non-functional Binders)

NO3.4: 3 residues within 4Å: Chain A: F.46, K.47, R.81 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.81, A:R.81 Water bridges: A:K.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kirkman, T.K. et al., Crystal structure of candida auris dihydrofolate reductase. To Be Published

Release Date

2023-06-14

Peptides

Dihydrofolate reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Dihydrofolate reductase