SMTL ID : 8a0u.1 (3 other biounits)

Crystal structure of TEAD3 in complex with CPD4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.89 Å

Oligo State

monomer

Ligands

1 x MYR: MYRISTIC ACID(Covalent)

MYR.1: 17 residues within 4Å: Chain A: Y.16, A.18, F.34, A.87, L.89, T.119, K.131, M.153, C.154, M.157, F.160, I.161, L.164, L.177, F.180, I.182, F.202 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:A.18, A:F.34, A:A.87, A:L.89, A:T.119, A:F.160, A:I.161, A:I.161, A:L.164, A:L.177, A:F.180, A:F.202, A:F.202 Hydrogen bonds: A:C.154

1 x KMU: 2-[(2~{S})-2-(aminomethyl)-5-chloranyl-2-phenyl-3~{H}-1-benzofuran-4-yl]benzamide(Non-covalent)

KMU.2: 14 residues within 4Å: Chain A: Q.56, I.57, K.60, F.61, L.82, K.84, F.85, W.86, L.177, E.178, T.181, V.201, F.202, E.203 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.57, A:K.60, A:L.82, A:K.84, A:W.86, A:T.181, A:V.201, A:V.201, A:E.203 Hydrogen bonds: A:Q.56, A:E.178 pi-Cation interactions: A:K.60

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 2 residues within 4Å: Chain A: C.154, E.155 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.155 Water bridges: A:Y.156 PO4.4: 4 residues within 4Å: Chain A: H.36, I.37, G.38, H.213 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.38 Salt bridges: A:H.36, A:H.213 PO4.5: 2 residues within 4Å: Chain A: K.31, H.149 3 PLIP interactions: 3 interactions with chain A Water bridges: A:H.149 Salt bridges: A:K.31, A:H.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Furet, P. et al., The First Class of Small Molecules Potently Disrupting the YAP-TEAD Interaction by Direct Competition. Chemmedchem (2022)

Release Date

2022-08-17

Peptides

Transcriptional enhancer factor TEF-5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcriptional enhancer factor TEF-5

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