SMTL ID : 8a28.1 (1 other biounit)

Structure of the astacin zymogen of LAST-MAM from Limulus polyphemus

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: D.17, H.118, H.122, H.128, Y.177 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.17, A:D.17, A:H.118, A:H.122, A:H.128

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 6 residues within 4Å: Chain A: H.10, S.11, L.13, G.16, M.150, N.153 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.10, A:L.13

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 2 residues within 4Å: Chain A: E.1, V.199 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guevara, T. et al., Zymogenic latency in an ∼250-million-year-old astacin metallopeptidase. Acta Crystallogr D Struct Biol (2022)

Release Date

2022-10-19

Peptides

Metalloendopeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Metalloendopeptidase

Related Entries With Identical Sequence