SMTL ID : 8a4y.1

SARS-CoV-2 non-structural protein-1 (nsp1) in complex with N-(2,3-dihydro-1H-inden-5-yl)acetamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.10 Å

Oligo State

monomer

Ligands

1 x QO6: N-(2,3-dihydro-1H-inden-5-yl)acetamide(Non-covalent)

QO6.1: 7 residues within 4Å: Chain A: V.6, L.8, R.35, L.38, K.39, L.115, K.117 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.6, A:R.35, A:K.39, A:K.39, A:K.39, A:L.115, A:K.117 Hydrogen bonds: A:K.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Borsatto, A. et al., Revealing druggable cryptic pockets in the Nsp1 of SARS-CoV-2 and other beta-coronaviruses by simulations and crystallography. Elife (2022)

Release Date

2022-11-23

Peptides

Host translation inhibitor nsp1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Host translation inhibitor nsp1

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