SMTL ID : 8a5y.1

S. cerevisiae apo unphosphorylated APC/C.

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-2-1-1-1-1-1-2-1-1-1-1-mer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain I: C.52, C.55, C.62, H.76 4 PLIP interactions: 4 interactions with chain I Metal complexes: I:C.52, I:C.55, I:C.62, I:H.76 ZN.2: 4 residues within 4Å: Chain I: C.69, H.71, C.91, C.94 5 PLIP interactions: 5 interactions with chain I Metal complexes: I:C.69, I:H.71, I:H.71, I:C.91, I:C.94 ZN.3: 5 residues within 4Å: Chain I: C.41, C.44, C.52, H.74, C.77 5 PLIP interactions: 5 interactions with chain I Metal complexes: I:C.41, I:C.44, I:H.74, I:H.74, I:C.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barford, D. et al., Cryo-EM structure of the S. cerevisiae APC/C-Cdh1 complex and comparison to apo unphosphorylated and phosphorylated states. To Be Published

Release Date

2022-08-31

Peptides

Anaphase-promoting complex subunit CDC27: AF
Anaphase-promoting complex subunit CDC16: BC
Anaphase-promoting complex subunit CDC26: DE
Anaphase-promoting complex subunit 9: G
Anaphase-promoting complex subunit 2: H
Anaphase-promoting complex subunit 11: I
Anaphase-promoting complex subunit 1: J
Anaphase-promoting complex subunit 5: K
Anaphase-promoting complex subunit CDC23: LM
Anaphase-promoting complex subunit SWM1: N
Anaphase-promoting complex subunit MND2: O
Anaphase-promoting complex subunit 4: P
Anaphase-promoting complex subunit DOC1: Q

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

F
H

B
J

C
K

D
G

E
W

G
E

H
T

I
U

J
C

K
O

L
D

M
P

N
I

O
N

P
Q

Q
A

Anaphase-promoting complex subunit CDC27

Anaphase-promoting complex subunit CDC16

Anaphase-promoting complex subunit CDC26

Anaphase-promoting complex subunit 9

Anaphase-promoting complex subunit 2

Anaphase-promoting complex subunit 11

Anaphase-promoting complex subunit 1

Anaphase-promoting complex subunit 5

Anaphase-promoting complex subunit CDC23

Anaphase-promoting complex subunit SWM1

Anaphase-promoting complex subunit MND2

Anaphase-promoting complex subunit 4

Anaphase-promoting complex subunit DOC1

Related Entries With Identical Sequence