SMTL ID : 8a6e.1

100 picosecond light activated crystal structure of bovine rhodopsin in Lipidic Cubic Phase (SACLA)

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.80 Å
Oligo State
homo-dimer
Ligands
2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x RET: RETINAL(Covalent)
2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x DAO: LAURIC ACID(Non-covalent)
13 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)
2 x PLM: PALMITIC ACID(Covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Gruhl, T. et al., Ultrafast structural changes direct the first molecular events of vision. Nature (2023)
Release Date
2023-03-29
Peptides
Rhodopsin: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
Membrane
We predict this structure to be a membrane protein.

Rhodopsin

Related Entries With Identical Sequence

1gzm.1 | 1hzx.1 | 1hzx.2 | 1hzx.3 | 1hzx.4 | 1l9h.1 | 1l9h.2 | 1l9h.3 | 1l9h.4 | 1u19.1 | 1u19.2 | 2g87.1 | 2g87.2 | 2hpy.1 | 2hpy.2 | 2i35.1 | 2i36.1 | 2i36.2 | 2i36.3 | 2i37.1 | 2i37.2 | 2i37.3 | 2ped.1 | 2ped.2 | 3oax.1 | 3oax.2 | 3oax.3 | 5te5.1