SMTL ID : 8a9q.1 (1 other biounit)

Computational design of stable mammalian serum albumins for bacterial expression

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

4 x MYR: MYRISTIC ACID(Non-covalent)

MYR.1: 12 residues within 4Å: Chain A: S.342, V.344, R.348, P.384, L.387, I.388, N.391, F.403, G.434, L.453, R.485 Ligands: MYR.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.344, A:L.387, A:I.388, A:N.391, A:F.403, A:L.453 Hydrogen bonds: A:S.342 Salt bridges: A:R.348, A:R.485 MYR.2: 11 residues within 4Å: Chain A: L.387, R.410, Y.411, V.415, V.418, L.430, L.457, L.460, F.488, S.489 Ligands: MYR.1 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Y.411, A:Y.411, A:Y.411, A:V.415, A:V.418, A:L.430, A:L.457, A:L.460, A:F.488, A:F.488 Hydrogen bonds: A:Y.411, A:Y.411 Salt bridges: A:R.410, A:K.414 MYR.3: 8 residues within 4Å: Chain A: Y.401, F.507, K.525, L.529, M.548, F.551, S.552, S.579 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.507, A:F.507, A:L.529, A:M.548, A:F.551, A:F.551, A:F.551 Hydrogen bonds: A:S.552 Salt bridges: A:K.525 MYR.4: 9 residues within 4Å: Chain A: R.209, A.210, A.213, V.216, D.324, L.327, G.328, K.351, L.481 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:A.213, A:V.216, A:L.327

1 x RWF: R-WARFARIN(Non-covalent)

RWF.5: 12 residues within 4Å: Chain A: K.199, W.214, R.218, L.219, R.222, L.238, H.242, R.257, L.260, I.264, S.287, A.291 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:K.199, A:K.199, A:W.214, A:L.219, A:L.238, A:L.260, A:I.264 Salt bridges: A:R.222

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Khersonsky, O. et al., Stable Mammalian Serum Albumins Designed for Bacterial Expression. J.Mol.Biol. (2023)

Release Date

2023-05-10

Peptides

Albumin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Albumin

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